About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf10000_2.0
PE_Scaf10000_3.0
PE_Scaf10000_3.5METHANETHIOL OXIDASE
PE_Scaf10000_4.5
PE_Scaf10000_6.0
PE_Scaf10000_6.7S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
PE_Scaf10000_6.8OVOCHYMASE-RELATED
PE_Scaf10001_0.1
PE_Scaf10001_0.4
PE_Scaf10002_1.0GALACTOSE-3-O-SULFOTRANSFERASE
PE_Scaf10002_4.10UNC-13-4A, ISOFORM B
PE_Scaf10002_4.11EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
PE_Scaf10002_4.5ATP-DEPENDENT DNA HELICASE
PE_Scaf10002_5.10
PE_Scaf10002_5.15ATP-DEPENDENT DNA HELICASE
PE_Scaf10002_5.17
PE_Scaf10002_5.2
PE_Scaf10003_0.10DBX
PE_Scaf10003_0.14
PE_Scaf10003_0.9ZGC:172139
PE_Scaf10004_0.1
PE_Scaf10004_0.12
PE_Scaf10004_0.2
PE_Scaf10004_0.3
PE_Scaf10004_0.4
PE_Scaf10005_1.3
PE_Scaf10005_10.0
PE_Scaf10005_10.1
PE_Scaf10005_10.3
PE_Scaf10005_10.5
PE_Scaf10005_10.6
PE_Scaf10005_2.5
PE_Scaf10005_2.6
PE_Scaf10005_3.2
PE_Scaf10005_4.3
PE_Scaf10005_5.0
PE_Scaf10005_6.1
PE_Scaf10005_6.4UREASE ACCESSORY PROTEIN G
PE_Scaf10005_6.5UREASE
PE_Scaf10005_7.3UREASE
PE_Scaf10005_8.3
PE_Scaf10005_9.18DELTA ADAPTIN-RELATED
PE_Scaf10005_9.19
PE_Scaf10005_9.20CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
PE_Scaf10005_9.24ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
PE_Scaf10005_9.8
PE_Scaf10008_0.3GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
PE_Scaf10008_0.9MORN REPEAT-CONTAINING PROTEIN 5
PE_Scaf10012_0.0
PE_Scaf10012_0.1
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