About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf1003_1.6-
PE_Scaf1003_2.5PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
PE_Scaf1003_3.4RAB GDP/GTP EXCHANGE FACTOR
PE_Scaf1003_3.5VESICLE-ASSOCIATED MEMBRANE PROTEIN 4
PE_Scaf1003_4.1CBL
PE_Scaf1003_5.4UNCHARACTERIZED
PE_Scaf1003_6.4AMMONIUM TRANSPORTER
PE_Scaf1003_6.5SYNTENIN RELATED
PE_Scaf10040_0.0
PE_Scaf10040_0.14SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2
PE_Scaf10040_0.15
PE_Scaf10040_0.18LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN
PE_Scaf10040_0.5
PE_Scaf10040_0.6-
PE_Scaf10042_0.7TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf10042_0.8
PE_Scaf10045_0.0
PE_Scaf10045_0.1
PE_Scaf10045_1.2-
PE_Scaf10045_3.1
PE_Scaf10045_3.2
PE_Scaf10045_3.6CYSTEINE-RICH SECRETORY PROTEIN-RELATED
PE_Scaf10053_1.0
PE_Scaf10054_0.0
PE_Scaf10054_0.4
PE_Scaf10058_0.4AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf1005_0.0MISSHAPEN LIKE KINASE 1
PE_Scaf1005_1.4TRANSFERASE, PUTATIVE-RELATED
PE_Scaf1005_1.5GABA-B RECEPTOR
PE_Scaf1005_2.0GALACTOSE-3-O-SULFOTRANSFERASE
PE_Scaf1005_2.1
PE_Scaf1005_2.10
PE_Scaf10060_0.3NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf10068_0.4TUMOR NECROSIS FACTOR FAMILY MEMBER
PE_Scaf10073_1.2METHANETHIOL OXIDASE
PE_Scaf10073_2.0
PE_Scaf10073_2.5
PE_Scaf10074_1.2IONOTROPIC RECEPTOR 20A-RELATED
PE_Scaf10074_2.5IONOTROPIC GLUTAMATE RECEPTOR
PE_Scaf10074_2.6
PE_Scaf10076_0.0
PE_Scaf10076_0.2
PE_Scaf10076_1.3SHORT-CHAIN DEHYDROGENASE/REDUCTASE
PE_Scaf10076_10.0
PE_Scaf10076_11.0
PE_Scaf10076_11.5BECLIN 1
PE_Scaf10076_11.6DULLARD PROTEIN PHOSPHATASE
PE_Scaf10076_12.1HYCCIN RELATED
PE_Scaf10076_13.339S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL
PE_Scaf10076_14.10ANION EXCHANGE PROTEIN
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