About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf10240_0.2METHYLTRANSFERASE
PE_Scaf10240_1.10TENASCIN
PE_Scaf10240_1.12FIBRILLIN-RELATED
PE_Scaf10240_1.13
PE_Scaf10240_1.14
PE_Scaf10240_1.15TENASCIN
PE_Scaf10240_1.16TENASCIN
PE_Scaf10241_0.3FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PE_Scaf10245_0.1
PE_Scaf10247_0.0
PE_Scaf10247_0.1
PE_Scaf10247_0.3
PE_Scaf10248_0.3TNF RECEPTOR ASSOCIATED FACTOR
PE_Scaf10249_0.3
PE_Scaf10250_0.0
PE_Scaf10250_0.2
PE_Scaf10251_0.7NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf10253_0.0
PE_Scaf10253_0.12
PE_Scaf10253_0.14
PE_Scaf10253_0.15
PE_Scaf10254_0.0
PE_Scaf10254_0.10DELTA ADAPTIN-RELATED
PE_Scaf10254_0.2
PE_Scaf10256_0.1
PE_Scaf10258_0.0
PE_Scaf10259_0.0
PE_Scaf1025_1.2AGAP012002-PA
PE_Scaf1025_4.0
PE_Scaf1025_4.1
PE_Scaf1025_4.5CLATHRIN HEAVY CHAIN RELATED
PE_Scaf10260_0.4TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
PE_Scaf10261_0.0
PE_Scaf10261_0.3
PE_Scaf10263_0.3RW1 PROTEIN HOMOLOG
PE_Scaf10264_0.4
PE_Scaf10264_0.6DNAJ HOMOLOG SUBFAMILY B MEMBER 2
PE_Scaf10264_2.2
PE_Scaf10264_2.3CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B
PE_Scaf10264_3.1
PE_Scaf10264_3.3
PE_Scaf10264_3.6G PROTEIN-COUPLED RECEPTOR
PE_Scaf10265_0.2LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf10265_1.2LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf10265_1.3UNCHARACTERIZED
PE_Scaf10265_2.0
PE_Scaf10265_3.0
PE_Scaf10267_0.1NYD-SP28 PROTEIN
PE_Scaf10269_1.4PDF RECEPTOR-LIKE PROTEIN-RELATED
PE_Scaf10269_2.1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
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