About Branchipolynoe longqiensis

Branchipolynoe longqiensis is a species of scale worm in the family Polynoidae, discovered in the Longqi hydrothermal vent field on the Southwest Indian Ridge. This species is distinguished by its biramous parapodia with reduced notopodia, stout notosetae, and branchiae with short terminal filaments. Adapted to extreme hydrothermal vent environments, Branchipolynoe longqiensis contributes to the unique biodiversity of these ecosystems and provides insights into the adaptations of organisms to high-temperature and chemically rich habitats.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Errantia (Subclass); Phyllodocida (Order); Aphroditiformia (Suborder); Polynoidae (Family); Macellicephalinae (Subfamily); Lepidonotopodini (Tribe); Branchipolynoe (Genus); Branchipolynoe longqiensis (Species)

Original Name

Branchipolynoe longqiensis Zhou, Zhang, Lu & Wang, 2017

Key Reference Paper

1. Zhou Y, Zhang D, Lu B, et al. Description of a new branchiate scale-worm (Polychaeta: Polynoidae) from the hydrothermal vent on Southwest Indian Ocean Ridge[J]. Zootaxa, 2017, 4282(1): 123-134. (Zhou et al., 2017)
2. He X, Wang H, Xu T, et al. Genomic analysis of a scale worm provides insights into its adaptation to deep-sea hydrothermal vents[J]. Genome Biology and Evolution, 2023, 15(7): evad125. (He et al., 2023)

Description

Body short, slightly tapered anteriorly and posteriorly, flattened ventrally and arched dorsally. 21 segments with 10 pairs of elytra and short elytrophores present on segments 2, 4, 5, 7, 9, 11, 13, 15, 17 and 19. The elytra are moderately large, oval, opaque and smooth, covering the anterior and posterior dorsal ends completely, but leaving the middle of the body just partially covered. Dorsal cirri with short cylindrical cirrophores present on non-elytra-bearing segments; short styles with slender tips, often extending to about tips of neurosetae, but with a few exceptions; Dorsal tubercles on cirrigerous segments indistinct

Etymology

named 'longqiensis' in reference to the collection site, the “Longqi” vent field on the SW Indian Ocean Ridge

Distribution

HOV Jiaolong Dive94, Longqi vent field, Southwest Indian Ocean Ridge, Southern Indian Ocean, 37.7839 S, 49.6502 E, 2761 m. Tiancheng and Wocan hydrothermal vent fields in the Indian Ocean (27.85 S 63.92 E)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Branchipolynoe longqiensisAnnelidascale wormCold seep2,705 or 2,970Tiancheng and Wocan hydrothermal vent fields in the Indian Ocean (27.85 S 63.92 E)2487007

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3032388v11.86GbChromosome2023JASIRB01Ocean University of ChinaPRJNA96192689.30 97,050/566.344.3571.1421,235

References
TitleJournalPubmed ID
Genomic Analysis of a Scale Worm Provides Insights into Its Adaptation to Deep-Sea Hydrothermal VentsGenome Biology and Evolution37401460

Gene Information

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Gene IDDescription
Blon|HiC_10G000001-
Blon|HiC_10G000002PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Blon|HiC_10G000003-
Blon|HiC_10G000004-
Blon|HiC_10G000005-
Blon|HiC_10G000006-
Blon|HiC_10G000007-
Blon|HiC_10G000008-
Blon|HiC_10G000009-
Blon|HiC_10G000010-
Blon|HiC_10G000011POTASSIUM CHANNEL, SUBFAMILY K
Blon|HiC_10G000012-
Blon|HiC_10G000013PROTEIN CBG11839-RELATED
Blon|HiC_10G000014-
Blon|HiC_10G000015-
Blon|HiC_10G000016-
Blon|HiC_10G000017POTASSIUM CHANNEL, SUBFAMILY K
Blon|HiC_10G000018TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Blon|HiC_10G000019SOLUTE CARRIER FAMILY 22 MEMBER
Blon|HiC_10G000020-

Results of comparison between Branchipolynoe longqiensis and its nearshore relatives from the paper (He et al., 2023)

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Annotation IDDescriptionTypeSubtypeGeneRatioEvolution TypeP-valueQ-value
GO:0005044scavenger receptor activityGOMolecular Function5/604contracted0.0084470660.02540471
GO:0006182cGMP biosynthetic processGOBiological Process14/229contracted1.18E-113.99E-10
GO:0001822kidney developmentGOBiological Process8/229contracted2.33E-073.93E-06
GO:0009190cyclic nucleotide biosynthetic processGOBiological Process7/229contracted8.69E-079.76E-06
GO:0009653anatomical structure morphogenesisGOBiological Process10/229contracted1.43E-061.21E-05
GO:0006310DNA recombinationGOBiological Process13/229contracted1.92E-061.26E-05
GO:0005975carbohydrate metabolic processGOBiological Process19/229contracted2.25E-061.26E-05
GO:0035556intracellular signal transductionGOBiological Process15/229contracted6.04E-062.91E-05
GO:0035725sodium ion transmembrane transportGOBiological Process4/246expanded0.0139333180.027076893
GO:0035725sodium ion transmembrane transportGOBiological Process7/229contracted1.03E-054.34E-05
GO:0030154cell differentiationGOBiological Process9/229contracted6.25E-050.000233806
GO:0045087innate immune responseGOBiological Process6/229contracted0.0002304020.00077609
GO:0006486protein glycosylationGOBiological Process12/229contracted0.0006195510.001897189
GO:0018108peptidyl-tyrosine phosphorylationGOBiological Process7/229contracted0.0010499580.002892063
GO:0006334nucleosome assemblyGOBiological Process6/229contracted0.0011161560.002892063
GO:0055085transmembrane transportGOBiological Process6/229contracted0.0027196850.006543604
GO:0060079excitatory postsynaptic potentialGOBiological Process12/246expanded9.36E-050.000295593
GO:0060079excitatory postsynaptic potentialGOBiological Process9/229contracted0.0037927920.008517146
GO:0002376immune system processGOBiological Process7/229contracted0.0042682240.008985734
GO:0034220monoatomic ion transmembrane transportGOBiological Process13/246expanded0.0016048570.003685795
GO:0034220monoatomic ion transmembrane transportGOBiological Process11/229contracted0.0078657080.015585303
GO:0006897endocytosisGOBiological Process4/229contracted0.0108671730.020336231
GO:0016311dephosphorylationGOBiological Process5/229contracted0.0140922050.024983411
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