About Branchipolynoe longqiensis

Branchipolynoe longqiensis is a species of scale worm in the family Polynoidae, discovered in the Longqi hydrothermal vent field on the Southwest Indian Ridge. This species is distinguished by its biramous parapodia with reduced notopodia, stout notosetae, and branchiae with short terminal filaments. Adapted to extreme hydrothermal vent environments, Branchipolynoe longqiensis contributes to the unique biodiversity of these ecosystems and provides insights into the adaptations of organisms to high-temperature and chemically rich habitats.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Errantia (Subclass); Phyllodocida (Order); Aphroditiformia (Suborder); Polynoidae (Family); Macellicephalinae (Subfamily); Lepidonotopodini (Tribe); Branchipolynoe (Genus); Branchipolynoe longqiensis (Species)

Original Name

Branchipolynoe longqiensis Zhou, Zhang, Lu & Wang, 2017

Key Reference Paper

1. Zhou Y, Zhang D, Lu B, et al. Description of a new branchiate scale-worm (Polychaeta: Polynoidae) from the hydrothermal vent on Southwest Indian Ocean Ridge[J]. Zootaxa, 2017, 4282(1): 123-134. (Zhou et al., 2017)
2. He X, Wang H, Xu T, et al. Genomic analysis of a scale worm provides insights into its adaptation to deep-sea hydrothermal vents[J]. Genome Biology and Evolution, 2023, 15(7): evad125. (He et al., 2023)

Description

Body short, slightly tapered anteriorly and posteriorly, flattened ventrally and arched dorsally. 21 segments with 10 pairs of elytra and short elytrophores present on segments 2, 4, 5, 7, 9, 11, 13, 15, 17 and 19. The elytra are moderately large, oval, opaque and smooth, covering the anterior and posterior dorsal ends completely, but leaving the middle of the body just partially covered. Dorsal cirri with short cylindrical cirrophores present on non-elytra-bearing segments; short styles with slender tips, often extending to about tips of neurosetae, but with a few exceptions; Dorsal tubercles on cirrigerous segments indistinct

Etymology

named 'longqiensis' in reference to the collection site, the “Longqi” vent field on the SW Indian Ocean Ridge

Distribution

HOV Jiaolong Dive94, Longqi vent field, Southwest Indian Ocean Ridge, Southern Indian Ocean, 37.7839 S, 49.6502 E, 2761 m. Tiancheng and Wocan hydrothermal vent fields in the Indian Ocean (27.85 S 63.92 E)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Branchipolynoe longqiensisAnnelidascale wormCold seep2,705 or 2,970Tiancheng and Wocan hydrothermal vent fields in the Indian Ocean (27.85 S 63.92 E)2487007

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3032388v11.86GbChromosome2023JASIRB01Ocean University of ChinaPRJNA96192689.30 97,050/566.344.3571.1421,235

References
TitleJournalPubmed ID
Genomic Analysis of a Scale Worm Provides Insights into Its Adaptation to Deep-Sea Hydrothermal VentsGenome Biology and Evolution37401460

Gene Information

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Gene IDDescription
Blon|HiC_10G000001-
Blon|HiC_10G000002PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Blon|HiC_10G000003-
Blon|HiC_10G000004-
Blon|HiC_10G000005-
Blon|HiC_10G000006-
Blon|HiC_10G000007-
Blon|HiC_10G000008-
Blon|HiC_10G000009-
Blon|HiC_10G000010-
Blon|HiC_10G000011POTASSIUM CHANNEL, SUBFAMILY K
Blon|HiC_10G000012-
Blon|HiC_10G000013PROTEIN CBG11839-RELATED
Blon|HiC_10G000014-
Blon|HiC_10G000015-
Blon|HiC_10G000016-
Blon|HiC_10G000017POTASSIUM CHANNEL, SUBFAMILY K
Blon|HiC_10G000018TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Blon|HiC_10G000019SOLUTE CARRIER FAMILY 22 MEMBER
Blon|HiC_10G000020-

Results of comparison between Branchipolynoe longqiensis and its nearshore relatives from the paper (He et al., 2023)

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Annotation IDDescriptionTypeSubtypeGeneRatioEvolution TypeP-valueQ-value
GO:0022857transmembrane transporter activityGOMolecular Function80/604contracted1.10E-336.92E-32
GO:0004383guanylate cyclase activityGOMolecular Function14/604contracted3.06E-099.67E-08
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenGOMolecular Function15/604contracted7.55E-081.59E-06
GO:0004497monooxygenase activityGOMolecular Function13/604contracted3.18E-075.01E-06
GO:0005509calcium ion bindingGOMolecular Function27/289expanded0.011047450.02093201
GO:0005509calcium ion bindingGOMolecular Function65/604contracted6.21E-077.84E-06
GO:0140359ABC-type transporter activityGOMolecular Function12/604contracted2.76E-062.90E-05
GO:0015293symporter activityGOMolecular Function5/289expanded0.0107178420.02093201
GO:0015293symporter activityGOMolecular Function12/604contracted7.53E-066.79E-05
GO:0005506iron ion bindingGOMolecular Function12/604contracted5.91E-050.000466216
GO:0016491oxidoreductase activityGOMolecular Function36/604contracted8.64E-050.0005995
GO:0052689carboxylic ester hydrolase activityGOMolecular Function8/604contracted9.49E-050.0005995
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compoundsGOMolecular Function10/604contracted0.0003909240.002244538
GO:0020037heme bindingGOMolecular Function12/604contracted0.0006549940.003447337
GO:0016757glycosyltransferase activityGOMolecular Function25/604contracted0.0011675480.005672298
GO:0008061chitin bindingGOMolecular Function12/604contracted0.0016587030.00748287
GO:0008237metallopeptidase activityGOMolecular Function17/604contracted0.0019050680.008021339
GO:0030234enzyme regulator activityGOMolecular Function5/604contracted0.002172020.008573765
GO:0004714transmembrane receptor protein tyrosine kinase activityGOMolecular Function7/604contracted0.0034029870.011447867
GO:0016849phosphorus-oxygen lyase activityGOMolecular Function7/604contracted0.0034029870.011447867
GO:0004713protein tyrosine kinase activityGOMolecular Function10/604contracted0.00344390.011447867
GO:0046983protein dimerization activityGOMolecular Function11/604contracted0.0036298330.011462631
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