About Branchipolynoe longqiensis

Branchipolynoe longqiensis is a species of scale worm in the family Polynoidae, discovered in the Longqi hydrothermal vent field on the Southwest Indian Ridge. This species is distinguished by its biramous parapodia with reduced notopodia, stout notosetae, and branchiae with short terminal filaments. Adapted to extreme hydrothermal vent environments, Branchipolynoe longqiensis contributes to the unique biodiversity of these ecosystems and provides insights into the adaptations of organisms to high-temperature and chemically rich habitats.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Errantia (Subclass); Phyllodocida (Order); Aphroditiformia (Suborder); Polynoidae (Family); Macellicephalinae (Subfamily); Lepidonotopodini (Tribe); Branchipolynoe (Genus); Branchipolynoe longqiensis (Species)

Original Name

Branchipolynoe longqiensis Zhou, Zhang, Lu & Wang, 2017

Key Reference Paper

1. Zhou Y, Zhang D, Lu B, et al. Description of a new branchiate scale-worm (Polychaeta: Polynoidae) from the hydrothermal vent on Southwest Indian Ocean Ridge[J]. Zootaxa, 2017, 4282(1): 123-134. (Zhou et al., 2017)
2. He X, Wang H, Xu T, et al. Genomic analysis of a scale worm provides insights into its adaptation to deep-sea hydrothermal vents[J]. Genome Biology and Evolution, 2023, 15(7): evad125. (He et al., 2023)

Description

Body short, slightly tapered anteriorly and posteriorly, flattened ventrally and arched dorsally. 21 segments with 10 pairs of elytra and short elytrophores present on segments 2, 4, 5, 7, 9, 11, 13, 15, 17 and 19. The elytra are moderately large, oval, opaque and smooth, covering the anterior and posterior dorsal ends completely, but leaving the middle of the body just partially covered. Dorsal cirri with short cylindrical cirrophores present on non-elytra-bearing segments; short styles with slender tips, often extending to about tips of neurosetae, but with a few exceptions; Dorsal tubercles on cirrigerous segments indistinct

Etymology

named 'longqiensis' in reference to the collection site, the “Longqi” vent field on the SW Indian Ocean Ridge

Distribution

HOV Jiaolong Dive94, Longqi vent field, Southwest Indian Ocean Ridge, Southern Indian Ocean, 37.7839 S, 49.6502 E, 2761 m. Tiancheng and Wocan hydrothermal vent fields in the Indian Ocean (27.85 S 63.92 E)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Branchipolynoe longqiensisAnnelidascale wormCold seep2,705 or 2,970Tiancheng and Wocan hydrothermal vent fields in the Indian Ocean (27.85 S 63.92 E)2487007

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3032388v11.86GbChromosome2023JASIRB01Ocean University of ChinaPRJNA96192689.30 97,050/566.344.3571.1421,235

References
TitleJournalPubmed ID
Genomic Analysis of a Scale Worm Provides Insights into Its Adaptation to Deep-Sea Hydrothermal VentsGenome Biology and Evolution37401460

Gene Information

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Gene IDDescription
Blon|HiC_10G000001-
Blon|HiC_10G000002PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Blon|HiC_10G000003-
Blon|HiC_10G000004-
Blon|HiC_10G000005-
Blon|HiC_10G000006-
Blon|HiC_10G000007-
Blon|HiC_10G000008-
Blon|HiC_10G000009-
Blon|HiC_10G000010-
Blon|HiC_10G000011POTASSIUM CHANNEL, SUBFAMILY K
Blon|HiC_10G000012-
Blon|HiC_10G000013PROTEIN CBG11839-RELATED
Blon|HiC_10G000014-
Blon|HiC_10G000015-
Blon|HiC_10G000016-
Blon|HiC_10G000017POTASSIUM CHANNEL, SUBFAMILY K
Blon|HiC_10G000018TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Blon|HiC_10G000019SOLUTE CARRIER FAMILY 22 MEMBER
Blon|HiC_10G000020-

Results of comparison between Branchipolynoe longqiensis and its nearshore relatives from the paper (He et al., 2023)

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Annotation IDDescriptionTypeSubtypeGeneRatioEvolution TypeP-valueQ-value
GO:0005488bindingGOMolecular Function18/289expanded0.0131304820.022617099
GO:0015074DNA integrationGOBiological Process111/246expanded9.70E-662.45E-64
GO:0006259DNA metabolic processGOBiological Process94/246expanded1.97E-472.49E-46
GO:0071897DNA biosynthetic processGOBiological Process39/246expanded3.53E-272.98E-26
GO:0006508proteolysisGOBiological Process62/246expanded3.24E-152.05E-14
GO:0006956complement activationGOBiological Process8/246expanded2.16E-061.09E-05
GO:0010466negative regulation of peptidase activityGOBiological Process9/246expanded6.36E-062.68E-05
GO:0016055Wnt signaling pathwayGOBiological Process12/246expanded7.62E-062.75E-05
GO:0060079excitatory postsynaptic potentialGOBiological Process12/246expanded9.36E-050.000295593
GO:0060079excitatory postsynaptic potentialGOBiological Process9/229contracted0.0037927920.008517146
GO:0010951negative regulation of endopeptidase activityGOBiological Process9/246expanded0.0001511930.0004244
GO:0016079synaptic vesicle exocytosisGOBiological Process5/246expanded0.0004687080.001184104
GO:0034220monoatomic ion transmembrane transportGOBiological Process13/246expanded0.0016048570.003685795
GO:0034220monoatomic ion transmembrane transportGOBiological Process11/229contracted0.0078657080.015585303
GO:0006278RNA-templated DNA biosynthetic processGOBiological Process5/246expanded0.0040554060.008537698
GO:0035725sodium ion transmembrane transportGOBiological Process4/246expanded0.0139333180.027076893
GO:0035725sodium ion transmembrane transportGOBiological Process7/229contracted1.03E-054.34E-05
GO:0005886plasma membraneGOCellular Component105/1018contracted2.82E-121.42E-10
GO:0008076voltage-gated potassium channel complexGOCellular Component14/1018contracted3.52E-088.89E-07
GO:0005576extracellular regionGOCellular Component44/350expanded1.80E-151.51E-14
GO:0005576extracellular regionGOCellular Component53/1018contracted0.0001663340.002801415
GO:0005615extracellular spaceGOCellular Component7/350expanded0.0160371240.022508244
GO:0005615extracellular spaceGOCellular Component17/1018contracted0.0011328780.014310036
GO:0005938cell cortexGOCellular Component6/1018contracted0.001454670.014699822
GO:0009986cell surfaceGOCellular Component7/1018contracted0.0023370720.019680604
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