About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold14478.22919TAZ PROTEIN TAFAZZIN
mRNA.BJAM.scaffold1448.7981BETA-1,4-GALACTOSYLTRANSFERASE
mRNA.BJAM.scaffold1448.7982SOX100B
mRNA.BJAM.scaffold1448.7983HISTONE H1
mRNA.BJAM.scaffold1448.7984NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold14486.22920RE48511P
mRNA.BJAM.scaffold14486.22921RE48511P
mRNA.BJAM.scaffold14486.22922
mRNA.BJAM.scaffold14486.22923
mRNA.BJAM.scaffold14486.22924
mRNA.BJAM.scaffold145.1152MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1
mRNA.BJAM.scaffold145.1153GH16255P
mRNA.BJAM.scaffold145.1154PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
mRNA.BJAM.scaffold145.1155PYRUVATE KINASE
mRNA.BJAM.scaffold145.1156
mRNA.BJAM.scaffold145.1157BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED
mRNA.BJAM.scaffold145.1158DYNAMIN
mRNA.BJAM.scaffold145.1159ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN
mRNA.BJAM.scaffold145.1160SPLICING FACTOR 3B, SUBUNIT 1-RELATED
mRNA.BJAM.scaffold145.1162FOLYLPOLYGLUTAMATE SYNTHASE-RELATED
mRNA.BJAM.scaffold145.1163UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1
mRNA.BJAM.scaffold14502.22925
mRNA.BJAM.scaffold1451.7985D-GLUCURONYL C5-EPIMERASE
mRNA.BJAM.scaffold1451.7986
mRNA.BJAM.scaffold1451.7987HOMEOBOX PROTEIN NKX
mRNA.BJAM.scaffold14514.22927S-ADENOSYLMETHIONINE SYNTHETASE
mRNA.BJAM.scaffold1452.7988
mRNA.BJAM.scaffold1452.7989UNCHARACTERIZED
mRNA.BJAM.scaffold14529.22928-
mRNA.BJAM.scaffold14529.22929
mRNA.BJAM.scaffold14529.22930
mRNA.BJAM.scaffold14537.22931CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold1454.7990CATALASE
mRNA.BJAM.scaffold14544.22932OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold14544.22933OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold14544.22934OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1455.7991
mRNA.BJAM.scaffold1455.7992ADENOSINE/GUANOSINE DIPHOSPHATASE
mRNA.BJAM.scaffold1455.7993EPOXIDE HYDROLASE
mRNA.BJAM.scaffold1455.7994EPOXIDE HYDROLASE
mRNA.BJAM.scaffold1455.7995NIPSNAP-RELATED
mRNA.BJAM.scaffold1455.7996STATHMIN
mRNA.BJAM.scaffold1455.7997
mRNA.BJAM.scaffold1455.7998GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
mRNA.BJAM.scaffold14553.22935
mRNA.BJAM.scaffold1456.7999SUGAR KINASE
mRNA.BJAM.scaffold14564.22936
mRNA.BJAM.scaffold14565.22937
mRNA.BJAM.scaffold14565.22938
mRNA.BJAM.scaffold14565.22939
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