About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold14149.22825
mRNA.BJAM.scaffold1415.7877
mRNA.BJAM.scaffold14159.22826PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold14160.22827FUCOSE MUTAROTASE
mRNA.BJAM.scaffold14160.22828RNA PROCESSING PROTEIN LD23810P
mRNA.BJAM.scaffold14160.22829
mRNA.BJAM.scaffold14169.22830NETRIN/LAMININ-RELATED
mRNA.BJAM.scaffold14171.22831
mRNA.BJAM.scaffold14172.22832
mRNA.BJAM.scaffold14172.22833
mRNA.BJAM.scaffold1418.7878
mRNA.BJAM.scaffold14180.22834PLEXIN
mRNA.BJAM.scaffold14180.22835PLEXIN
mRNA.BJAM.scaffold14180.22836PLEXIN
mRNA.BJAM.scaffold14187.22837
mRNA.BJAM.scaffold14187.22838
mRNA.BJAM.scaffold14187.22839TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold14187.22840TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
mRNA.BJAM.scaffold1419.7879
mRNA.BJAM.scaffold1419.7880KRAB AND ZINC FINGER DOMAIN-CONTAINING
mRNA.BJAM.scaffold1419.7881DYNACTIN SUBUNIT
mRNA.BJAM.scaffold1419.7882F-BOX ONLY PROTEIN 6-LIKE PROTEIN
mRNA.BJAM.scaffold14194.22841
mRNA.BJAM.scaffold14194.22842SH3 DOMAIN-CONTAINING
mRNA.BJAM.scaffold14194.22843SH3 DOMAIN-CONTAINING
mRNA.BJAM.scaffold142.1132
mRNA.BJAM.scaffold142.1133CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold142.1134
mRNA.BJAM.scaffold142.1135
mRNA.BJAM.scaffold142.1136GLUTATHIONE S-TRANSFERASE
mRNA.BJAM.scaffold142.1137IONOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold142.1138
mRNA.BJAM.scaffold142.1139
mRNA.BJAM.scaffold142.1140EGF-LIKE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold142.1141CONTACTIN 5
mRNA.BJAM.scaffold142.1142CONTACTIN 5
mRNA.BJAM.scaffold142.1143CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold142.1144CARBON CATABOLITE REPRESSOR PROTEIN 4
mRNA.BJAM.scaffold1420.7883GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold1420.7884
mRNA.BJAM.scaffold1420.7885BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold1420.7886ZINC FINGER PROTEIN
mRNA.BJAM.scaffold1420.7887ZINC FINGER PROTEIN
mRNA.BJAM.scaffold1420.7888BTB DOMAIN TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold1420.7889TENSIN
mRNA.BJAM.scaffold14204.22844GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
mRNA.BJAM.scaffold1421.7890
mRNA.BJAM.scaffold14210.22845KU AUTOANTIGEN DNA HELICASE
mRNA.BJAM.scaffold14218.22846NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN
mRNA.BJAM.scaffold14218.22847NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN
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