About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold13968.22771MANNOSE-6-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold13968.22772MANNOSE-6-PHOSPHATE ISOMERASE
mRNA.BJAM.scaffold1397.7814
mRNA.BJAM.scaffold13975.22773EUKARYOTIC TRANSLATION INITIATION FACTOR 2A
mRNA.BJAM.scaffold1398.7815BEAT PROTEIN
mRNA.BJAM.scaffold1398.7816
mRNA.BJAM.scaffold1398.7817BEAT PROTEIN
mRNA.BJAM.scaffold1398.7818ARL14 EFFECTOR PROTEIN
mRNA.BJAM.scaffold1398.7819PROTEIN ARGININE N-METHYLTRANSFERASE
mRNA.BJAM.scaffold1398.7820TRANSMEMBRANE PROTEIN HTP-1 RELATED
mRNA.BJAM.scaffold1398.7821TRANSMEMBRANE PROTEIN HTP-1 RELATED
mRNA.BJAM.scaffold13984.22774ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
mRNA.BJAM.scaffold13985.22775STEROL DESATURASE
mRNA.BJAM.scaffold13988.22776MICROSOMAL DIPEPTIDASE
mRNA.BJAM.scaffold1399.7822
mRNA.BJAM.scaffold1399.7823
mRNA.BJAM.scaffold1399.7824
mRNA.BJAM.scaffold13990.22777
mRNA.BJAM.scaffold13991.22778SODIUM/CALCIUM EXCHANGER
mRNA.BJAM.scaffold13991.22779SODIUM/CALCIUM EXCHANGER
mRNA.BJAM.scaffold13994.22780
mRNA.BJAM.scaffold13994.22781
mRNA.BJAM.scaffold13994.22782
mRNA.BJAM.scaffold13994.22783ACROSIN-RELATED
mRNA.BJAM.scaffold13996.22784
mRNA.BJAM.scaffold14.85TTC17 PROTEIN
mRNA.BJAM.scaffold14.86
mRNA.BJAM.scaffold14.87
mRNA.BJAM.scaffold14.88
mRNA.BJAM.scaffold14.89SIDESTEP PROTEIN
mRNA.BJAM.scaffold14.90CONTACTIN 5
mRNA.BJAM.scaffold14.91
mRNA.BJAM.scaffold14.92
mRNA.BJAM.scaffold140.1106
mRNA.BJAM.scaffold1400.7825UNCHARACTERIZED
mRNA.BJAM.scaffold1400.7826
mRNA.BJAM.scaffold14003.22785NADH-CYTOCHROME B5 REDUCTASE
mRNA.BJAM.scaffold14009.22786AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28
mRNA.BJAM.scaffold1401.7827RAN BINDING PROTEIN
mRNA.BJAM.scaffold14012.22787
mRNA.BJAM.scaffold14012.22788
mRNA.BJAM.scaffold14013.22789
mRNA.BJAM.scaffold14013.22790
mRNA.BJAM.scaffold14013.22791
mRNA.BJAM.scaffold1402.7828UNCHARACTERIZED
mRNA.BJAM.scaffold1402.7829
mRNA.BJAM.scaffold1402.7830GLYPICAN
mRNA.BJAM.scaffold14023.22792ACROSIN-RELATED
mRNA.BJAM.scaffold14024.22793
mRNA.BJAM.scaffold14024.22794
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