About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1361.7642CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
mRNA.BJAM.scaffold1361.7643DYNEIN HEAVY CHAIN
mRNA.BJAM.scaffold1361.7644MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold1361.7645EXPORTIN 1/5
mRNA.BJAM.scaffold13612.22666
mRNA.BJAM.scaffold13612.22667DUAL SPECIFICITY PROTEIN PHOSPHATASE DDB_G0269404-RELATED
mRNA.BJAM.scaffold13612.22668SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN
mRNA.BJAM.scaffold13615.22669SORBITOL DEHYDROGENASE
mRNA.BJAM.scaffold13615.22670SORBITOL DEHYDROGENASE
mRNA.BJAM.scaffold13615.22671
mRNA.BJAM.scaffold1362.7646BOMB/KIRA PROTEINS
mRNA.BJAM.scaffold1362.7647INNER MEMBRANE TRANSPORTER YGJI-RELATED
mRNA.BJAM.scaffold1362.7648CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
mRNA.BJAM.scaffold1362.7649DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
mRNA.BJAM.scaffold1362.7650
mRNA.BJAM.scaffold1362.7651
mRNA.BJAM.scaffold1362.7652URIDINE KINASE
mRNA.BJAM.scaffold1362.7653WD REPEAT DOMAIN-CONTAINING FAMILY
mRNA.BJAM.scaffold1362.7654
mRNA.BJAM.scaffold1362.7655
mRNA.BJAM.scaffold13624.22672
mRNA.BJAM.scaffold13624.22673DEOXYRIBONUCLEASE TATDN2-RELATED
mRNA.BJAM.scaffold1363.7656
mRNA.BJAM.scaffold13631.22674CALCIUM BINDING PROTEINS
mRNA.BJAM.scaffold13632.22675
mRNA.BJAM.scaffold13632.22676
mRNA.BJAM.scaffold13634.22677
mRNA.BJAM.scaffold13634.22678
mRNA.BJAM.scaffold13634.22679
mRNA.BJAM.scaffold13634.22680
mRNA.BJAM.scaffold13640.22681
mRNA.BJAM.scaffold13646.22682
mRNA.BJAM.scaffold13646.22683IM:7138239
mRNA.BJAM.scaffold1365.7657ANKYRIN REPEAT CONTAINING
mRNA.BJAM.scaffold1365.7658ELONGATOR COMPLEX PROTEIN 2
mRNA.BJAM.scaffold1365.7659ELONGATOR COMPLEX PROTEIN 2
mRNA.BJAM.scaffold1365.7660
mRNA.BJAM.scaffold1365.7661
mRNA.BJAM.scaffold1365.7662
mRNA.BJAM.scaffold13651.22684TRANSMEMBRANE CHANNEL-RELATED
mRNA.BJAM.scaffold13651.22685
mRNA.BJAM.scaffold13660.22686DOUBLECORTIN DOMAIN CONTAINING 2
mRNA.BJAM.scaffold13660.22687
mRNA.BJAM.scaffold13660.22688SERINE/THREONINE-PROTEIN KINASE
mRNA.BJAM.scaffold13664.22689
mRNA.BJAM.scaffold1367.7663PROTEIN O-MANNOSYL-TRANSFERASE TMTC2
mRNA.BJAM.scaffold1367.7664-
mRNA.BJAM.scaffold1367.7665
mRNA.BJAM.scaffold1367.7666
mRNA.BJAM.scaffold1367.7667HEAT SHOCK TRANSCRIPTION FACTOR
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