About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold13396.22602
mRNA.BJAM.scaffold134.1058
mRNA.BJAM.scaffold134.1059CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
mRNA.BJAM.scaffold134.1060VITELLOGENIN-RELATED
mRNA.BJAM.scaffold134.1061
mRNA.BJAM.scaffold134.1062
mRNA.BJAM.scaffold134.1063VITELLOGENIN-RELATED
mRNA.BJAM.scaffold134.1064
mRNA.BJAM.scaffold134.1065INTEGRIN ALPHA
mRNA.BJAM.scaffold134.1066INTEGRIN ALPHA
mRNA.BJAM.scaffold134.1067FUKUTIN-RELATED
mRNA.BJAM.scaffold134.1068ANION EXCHANGE PROTEIN
mRNA.BJAM.scaffold134.1069ANION EXCHANGE PROTEIN
mRNA.BJAM.scaffold134.1070ANION EXCHANGE PROTEIN
mRNA.BJAM.scaffold134.1071ARGININOSUCCINATE LYASE
mRNA.BJAM.scaffold134.1072ANION EXCHANGE PROTEIN
mRNA.BJAM.scaffold13401.22603
mRNA.BJAM.scaffold13401.22604MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold13401.22605
mRNA.BJAM.scaffold13401.22606
mRNA.BJAM.scaffold13402.22607
mRNA.BJAM.scaffold13404.22608ALDEHYDE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold13404.22609ALDEHYDE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold13405.22610DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
mRNA.BJAM.scaffold13405.22611DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
mRNA.BJAM.scaffold13407.22612
mRNA.BJAM.scaffold1341.7571
mRNA.BJAM.scaffold13414.22613
mRNA.BJAM.scaffold13421.22614LIM DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold13421.22615PDZ AND LIM DOMAIN PROTEIN ZASP
mRNA.BJAM.scaffold13421.22616
mRNA.BJAM.scaffold13424.22617
mRNA.BJAM.scaffold1343.7572ANKYRIN REPEAT FAMILY PROTEIN
mRNA.BJAM.scaffold1343.7573
mRNA.BJAM.scaffold1343.7574TRANSCRIPTIONAL REPRESSOR PROTEIN YY
mRNA.BJAM.scaffold1343.7575UNCHARACTERIZED
mRNA.BJAM.scaffold1343.7576
mRNA.BJAM.scaffold1343.7577
mRNA.BJAM.scaffold1343.7578LIM/HOMEOBOX PROTEIN LHX
mRNA.BJAM.scaffold1343.7579
mRNA.BJAM.scaffold1343.7580LIM/HOMEOBOX PROTEIN LHX
mRNA.BJAM.scaffold13438.22618
mRNA.BJAM.scaffold13438.22619
mRNA.BJAM.scaffold1344.7581OPSIN
mRNA.BJAM.scaffold1344.7582
mRNA.BJAM.scaffold1344.7583-
mRNA.BJAM.scaffold1344.7584-
mRNA.BJAM.scaffold1344.7585ADHESION G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold13443.22620
mRNA.BJAM.scaffold13443.22621SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
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