About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold13139.22516MELANOMA INHIBITORY ACTIVITY-RELATED
mRNA.BJAM.scaffold1314.7473SIDESTEP PROTEIN
mRNA.BJAM.scaffold1314.7474
mRNA.BJAM.scaffold13141.22517
mRNA.BJAM.scaffold13141.22518
mRNA.BJAM.scaffold13143.22519
mRNA.BJAM.scaffold13149.22520CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold13149.22521
mRNA.BJAM.scaffold1315.7475GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
mRNA.BJAM.scaffold1315.7476GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
mRNA.BJAM.scaffold1315.7477
mRNA.BJAM.scaffold1315.7478GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
mRNA.BJAM.scaffold13151.22522
mRNA.BJAM.scaffold13153.22523
mRNA.BJAM.scaffold13154.22524PROSTAGLANDIN REDUCTASE
mRNA.BJAM.scaffold1316.7479ACROSIN-RELATED
mRNA.BJAM.scaffold1316.7480ACROSIN-RELATED
mRNA.BJAM.scaffold1316.748160S RIBOSOMAL PROTEIN L27
mRNA.BJAM.scaffold1316.7482OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1316.7483OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1316.7484S -2-HYDROXY-ACID OXIDASE-RELATED
mRNA.BJAM.scaffold1316.7485
mRNA.BJAM.scaffold1316.7486PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
mRNA.BJAM.scaffold1316.7487
mRNA.BJAM.scaffold13161.22525
mRNA.BJAM.scaffold13162.22526SYNAPTIC ADHESION-LIKE MOLECULE SALM
mRNA.BJAM.scaffold13162.22527
mRNA.BJAM.scaffold13167.22528
mRNA.BJAM.scaffold1317.7488GOLGIN- RELATED
mRNA.BJAM.scaffold1318.7489CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
mRNA.BJAM.scaffold1318.7490
mRNA.BJAM.scaffold1318.7491SKELETOR-RELATED
mRNA.BJAM.scaffold1318.7492SKELETOR-RELATED
mRNA.BJAM.scaffold1318.7493
mRNA.BJAM.scaffold1318.749460S RIBOSOMAL PROTEIN L18
mRNA.BJAM.scaffold1318.7495
mRNA.BJAM.scaffold1318.7496MYOSIN HEAVY CHAIN, NON-MUSCLE
mRNA.BJAM.scaffold1318.7497TRANSCRIPTIONAL ADAPTER 3-RELATED
mRNA.BJAM.scaffold1318.7498RHO GTPASE-ACTIVATING PROTEIN 190
mRNA.BJAM.scaffold1318.7499RHO GTPASE-ACTIVATING PROTEIN 190
mRNA.BJAM.scaffold1318.7500RHO GTPASE-ACTIVATING PROTEIN 190
mRNA.BJAM.scaffold1318.7501RHO GTPASE-ACTIVATING PROTEIN 190
mRNA.BJAM.scaffold13180.22530
mRNA.BJAM.scaffold13183.22531
mRNA.BJAM.scaffold13183.22532
mRNA.BJAM.scaffold1319.7502
mRNA.BJAM.scaffold1319.7503
mRNA.BJAM.scaffold1319.7504HEAT SHOCK PROTEIN 70KDA
mRNA.BJAM.scaffold1319.7505DYMECLIN
mRNA.BJAM.scaffold1319.7506APOSPORY-ASSOCIATED PROTEIN C-RELATED
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