About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold12760.22384PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
mRNA.BJAM.scaffold12763.22385HUEL-CATION TRANSPORTER
mRNA.BJAM.scaffold12763.22386ZYGIN
mRNA.BJAM.scaffold12763.22387
mRNA.BJAM.scaffold12769.22388BESTROPHIN
mRNA.BJAM.scaffold12772.22390UNCHARACTERIZED
mRNA.BJAM.scaffold12773.22391
mRNA.BJAM.scaffold12775.22392
mRNA.BJAM.scaffold12776.22393LYSOSOMAL ACID LIPASE-RELATED
mRNA.BJAM.scaffold12776.22394
mRNA.BJAM.scaffold12776.22395AHD DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold12777.22396
mRNA.BJAM.scaffold12777.22397
mRNA.BJAM.scaffold12783.22398
mRNA.BJAM.scaffold1279.7332PROTEIN SIDEKICK
mRNA.BJAM.scaffold1279.7333
mRNA.BJAM.scaffold1279.7334
mRNA.BJAM.scaffold1279.7335CADHERIN-87A
mRNA.BJAM.scaffold1279.7336CADHERIN-23
mRNA.BJAM.scaffold1279.7337CADHERIN-23
mRNA.BJAM.scaffold1279.7338
mRNA.BJAM.scaffold1279.7339SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
mRNA.BJAM.scaffold1279.7340LD44762P
mRNA.BJAM.scaffold1279.7341ALDEHYDE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold12790.22399LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold12791.22400
mRNA.BJAM.scaffold12791.22401
mRNA.BJAM.scaffold12792.22402DYNAMIN
mRNA.BJAM.scaffold12792.22403
mRNA.BJAM.scaffold12796.22405MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold12796.22406MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold12796.22407
mRNA.BJAM.scaffold12796.22408MALE FERTILITY FACTOR KL5
mRNA.BJAM.scaffold128.1004AP COMPLEX SUBUNIT MU
mRNA.BJAM.scaffold128.1005INNEXIN
mRNA.BJAM.scaffold128.1006
mRNA.BJAM.scaffold128.1007INNEXIN
mRNA.BJAM.scaffold128.1008
mRNA.BJAM.scaffold128.1009INNEXIN
mRNA.BJAM.scaffold128.1010INNEXIN
mRNA.BJAM.scaffold128.1011INNEXIN
mRNA.BJAM.scaffold128.1012L-THREONINE ALDOLASE-RELATED
mRNA.BJAM.scaffold12806.22409COPINE
mRNA.BJAM.scaffold12807.22410CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
mRNA.BJAM.scaffold12809.22411ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
mRNA.BJAM.scaffold1281.7342
mRNA.BJAM.scaffold1281.7343
mRNA.BJAM.scaffold1281.7344
mRNA.BJAM.scaffold12816.22412
mRNA.BJAM.scaffold12819.22413
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