About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1264.7287H4 D10S170 PROTEIN-RELATED
mRNA.BJAM.scaffold1264.7288MALATE DEHYDROGENASE
mRNA.BJAM.scaffold1264.7289OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1264.7290OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1264.7291OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold1264.7292IMPORTIN-7, 8, 11
mRNA.BJAM.scaffold1264.7293IMPORTIN-7, 8, 11
mRNA.BJAM.scaffold12645.22329
mRNA.BJAM.scaffold12647.22330ALPHA-MANNOSIDASE
mRNA.BJAM.scaffold12648.22331
mRNA.BJAM.scaffold1265.7294SWI/SNF-RELATED
mRNA.BJAM.scaffold1265.7295SWI/SNF-RELATED
mRNA.BJAM.scaffold1265.7296TRANSMEMBRANE PROTEIN 15-RELATED
mRNA.BJAM.scaffold1265.7297AMP DEAMINASE
mRNA.BJAM.scaffold12651.22332
mRNA.BJAM.scaffold12654.22333
mRNA.BJAM.scaffold1266.7298
mRNA.BJAM.scaffold1266.7299BASIGIN RELATED
mRNA.BJAM.scaffold1266.7300TITIN
mRNA.BJAM.scaffold1266.7301
mRNA.BJAM.scaffold1266.7302
mRNA.BJAM.scaffold1266.7303CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER
mRNA.BJAM.scaffold1266.7304PHOSPHORYLATED CTD INTERACTING FACTOR 1
mRNA.BJAM.scaffold1266.7305PHOSPHORYLATED CTD INTERACTING FACTOR 1
mRNA.BJAM.scaffold12662.22334LD33804P
mRNA.BJAM.scaffold12663.22335E3 UBIQUITIN-PROTEIN LIGASE UBR4
mRNA.BJAM.scaffold12663.22336E3 UBIQUITIN-PROTEIN LIGASE UBR4
mRNA.BJAM.scaffold12663.22337E3 UBIQUITIN-PROTEIN LIGASE UBR4
mRNA.BJAM.scaffold12663.22338E3 UBIQUITIN-PROTEIN LIGASE UBR4
mRNA.BJAM.scaffold12663.22339
mRNA.BJAM.scaffold12663.22340E3 UBIQUITIN-PROTEIN LIGASE UBR4
mRNA.BJAM.scaffold12664.22341GLR0591 PROTEIN
mRNA.BJAM.scaffold12664.22343GLR0591 PROTEIN
mRNA.BJAM.scaffold12669.22344DICER-RELATED
mRNA.BJAM.scaffold12669.22345DICER-RELATED
mRNA.BJAM.scaffold12673.22346
mRNA.BJAM.scaffold12675.22347VESICULAR-FUSION PROTEIN NSF
mRNA.BJAM.scaffold12676.22348
mRNA.BJAM.scaffold1268.7306
mRNA.BJAM.scaffold1268.7307MONOACYLGLYCEROL LIPASE
mRNA.BJAM.scaffold12680.22349
mRNA.BJAM.scaffold12681.22350
mRNA.BJAM.scaffold12681.22351
mRNA.BJAM.scaffold12681.22352DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
mRNA.BJAM.scaffold12681.22353DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
mRNA.BJAM.scaffold12681.22354
mRNA.BJAM.scaffold12682.22356
mRNA.BJAM.scaffold12682.22357
mRNA.BJAM.scaffold12683.22358TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED
mRNA.BJAM.scaffold12683.22359TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED
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