About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold13303.22573
mRNA.BJAM.scaffold13304.22574NUCLEAR HORMONE RECEPTOR
mRNA.BJAM.scaffold13309.22575
mRNA.BJAM.scaffold1331.7549DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
mRNA.BJAM.scaffold1331.7550
mRNA.BJAM.scaffold13312.22576
mRNA.BJAM.scaffold1332.7551
mRNA.BJAM.scaffold13321.22577
mRNA.BJAM.scaffold13322.22578
mRNA.BJAM.scaffold13322.22579RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold13326.22580
mRNA.BJAM.scaffold1333.7552
mRNA.BJAM.scaffold1333.7553RHOMBOID-RELATED PROTEIN
mRNA.BJAM.scaffold1333.7554
mRNA.BJAM.scaffold1333.7555
mRNA.BJAM.scaffold1333.7556ECTOPIC P GRANULES PROTEIN 5 HOMOLOG
mRNA.BJAM.scaffold1333.7557FERMITIN 2-RELATED
mRNA.BJAM.scaffold1333.7558EGALITARIAN, ISOFORM B
mRNA.BJAM.scaffold1333.7559UNCHARACTERIZED
mRNA.BJAM.scaffold1333.7560
mRNA.BJAM.scaffold13332.22581ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold13335.22582SERINE PEPTIDASE S9 FAMILY MEMBER
mRNA.BJAM.scaffold13338.22583MITOCHONDRIA-EATING PROTEIN-RELATED
mRNA.BJAM.scaffold1334.7561
mRNA.BJAM.scaffold1334.7562APPLE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold13343.22584
mRNA.BJAM.scaffold13343.22585IONOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold1335.7563
mRNA.BJAM.scaffold1335.7564
mRNA.BJAM.scaffold1336.7565
mRNA.BJAM.scaffold1336.7566SIGNAL PEPTIDE PEPTIDASE
mRNA.BJAM.scaffold1336.7567ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold13364.22586GLR0591 PROTEIN
mRNA.BJAM.scaffold13364.22587GLR0591 PROTEIN
mRNA.BJAM.scaffold13365.22588OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold13367.22589OXIDASE/PEROXIDASE
mRNA.BJAM.scaffold13367.22590
mRNA.BJAM.scaffold1337.7568
mRNA.BJAM.scaffold13372.22591
mRNA.BJAM.scaffold13372.22592
mRNA.BJAM.scaffold13378.22594
mRNA.BJAM.scaffold13379.22595MELANOMA INHIBITORY ACTIVITY-RELATED
mRNA.BJAM.scaffold1338.7569
mRNA.BJAM.scaffold1338.7570CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold13381.22596
mRNA.BJAM.scaffold13390.22597AMPLIFIED IN BREAST CANCER 2-RELATED
mRNA.BJAM.scaffold13390.22598AMPLIFIED IN BREAST CANCER 2-RELATED
mRNA.BJAM.scaffold13392.22599TOLL-LIKE RECEPTOR
mRNA.BJAM.scaffold13392.22600
mRNA.BJAM.scaffold13395.22601RIBONUCLEASE H2 SUBUNIT A
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