About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold14218.22848NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN
mRNA.BJAM.scaffold1422.7891F-BOX ONLY PROTEIN 3
mRNA.BJAM.scaffold1422.7892
mRNA.BJAM.scaffold1422.78935-HYDROXYTRYPTAMINE RECEPTOR
mRNA.BJAM.scaffold14229.22850
mRNA.BJAM.scaffold14229.22851
mRNA.BJAM.scaffold14229.22852MATRIX METALLOPROTEINASE
mRNA.BJAM.scaffold1423.7894BEAT PROTEIN
mRNA.BJAM.scaffold1423.7895SERINE/THREONINE-PROTEIN KINASE 16
mRNA.BJAM.scaffold1423.7896SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
mRNA.BJAM.scaffold1423.7897
mRNA.BJAM.scaffold1423.7899DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
mRNA.BJAM.scaffold1423.7900
mRNA.BJAM.scaffold1423.7901HEPARAN SULFATE SULFOTRANSFERASE
mRNA.BJAM.scaffold1423.7902RHO FAMILY GTPASE
mRNA.BJAM.scaffold1423.7903PEPTIDASE S8
mRNA.BJAM.scaffold1423.7904UNCHARACTERIZED
mRNA.BJAM.scaffold1424.7906
mRNA.BJAM.scaffold1424.7907TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
mRNA.BJAM.scaffold1424.7908GLUTAMATE CYSTEINE LIGASE
mRNA.BJAM.scaffold14242.22853
mRNA.BJAM.scaffold1425.7909RWD DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold1425.7910
mRNA.BJAM.scaffold1425.7911ZINC FINGER PROTEIN
mRNA.BJAM.scaffold1425.7912
mRNA.BJAM.scaffold1426.7913UNCHARACTERIZED
mRNA.BJAM.scaffold14261.22854BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold14268.22855
mRNA.BJAM.scaffold1427.7914
mRNA.BJAM.scaffold1427.7915
mRNA.BJAM.scaffold1427.7916
mRNA.BJAM.scaffold1427.7917RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED
mRNA.BJAM.scaffold1427.7918
mRNA.BJAM.scaffold14278.22856
mRNA.BJAM.scaffold14278.22857
mRNA.BJAM.scaffold1428.7919SOX TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold14280.22858SENTRIN-SPECIFIC PROTEASE
mRNA.BJAM.scaffold14289.22859
mRNA.BJAM.scaffold1429.7920
mRNA.BJAM.scaffold1429.7921SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN
mRNA.BJAM.scaffold1429.7922RURM1 PROTEIN
mRNA.BJAM.scaffold1429.7923VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36
mRNA.BJAM.scaffold1429.7924TUDOR DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold14290.22860
mRNA.BJAM.scaffold14295.22861
mRNA.BJAM.scaffold143.1145
mRNA.BJAM.scaffold143.1146PIKACHURIN-LIKE PROTEIN
mRNA.BJAM.scaffold143.1147
mRNA.BJAM.scaffold143.1148COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6
mRNA.BJAM.scaffold143.1149
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