The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032872021.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032872022.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872023.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032872024.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872025.1 | FATTY ACID SYNTHASE |
| XP_032872026.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032872027.1 | FATTY ACID SYNTHASE |
| XP_032872028.1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| XP_032872029.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872030.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872031.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872032.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872033.1 | PATCHED-RELATED |
| XP_032872034.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872035.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872036.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032872037.1 | GOLGI-ASSOCIATED PROTEIN GCP360-RELATED |
| XP_032872038.1 | RAS-RELATED PROTEIN RAB |
| XP_032872039.1 | |
| XP_032872040.1 | DIMETHYLANILINE MONOOXYGENASE |
| XP_032872041.1 | DIMETHYLANILINE MONOOXYGENASE |
| XP_032872042.1 | CENTROMERE/KINETOCHORE PROTEIN ZW10 |
| XP_032872043.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032872044.1 | |
| XP_032872045.1 | |
| XP_032872046.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032872047.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032872048.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872049.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| XP_032872050.1 | G DOMAIN-CONTAINING PROTEIN |
| XP_032872051.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032872052.1 | G DOMAIN-CONTAINING PROTEIN |
| XP_032872053.1 | G DOMAIN-CONTAINING PROTEIN |
| XP_032872054.1 | AIG1-TYPE G DOMAIN-CONTAINING PROTEIN |
| XP_032872055.1 | AIG1-TYPE G DOMAIN-CONTAINING PROTEIN |
| XP_032872056.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032872057.1 | AIG1-TYPE G DOMAIN-CONTAINING PROTEIN |
| XP_032872058.1 | AIG1-TYPE G DOMAIN-CONTAINING PROTEIN |
| XP_032872059.1 | SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE |
| XP_032872060.1 | AAA-FAMILY ATPASE |
| XP_032872061.1 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
| XP_032872062.1 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
| XP_032872063.1 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| XP_032872064.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032872065.1 | |
| XP_032872066.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032872067.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032872068.1 | IP01015P-RELATED |
| XP_032872069.1 | IP01015P-RELATED |
| XP_032872070.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
