The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032872171.1 | RIIA DOMAIN-CONTAINING PROTEIN 1 |
| XP_032872172.1 | LARGE PROLINE-RICH PROTEIN BAG6 |
| XP_032872173.1 | LARGE PROLINE-RICH PROTEIN BAG6 |
| XP_032872174.1 | APOLIPOPROTEIN M |
| XP_032872175.1 | C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED |
| XP_032872176.1 | C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED |
| XP_032872177.1 | VALYL-TRNA SYNTHETASES |
| XP_032872178.1 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032872179.1 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032872180.1 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032872181.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032872182.1 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032872183.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032872184.1 | NEURALIZED |
| XP_032872185.1 | NEURALIZED |
| XP_032872186.1 | NEURALIZED |
| XP_032872187.1 | NEURALIZED |
| XP_032872188.1 | NEURALIZED |
| XP_032872189.1 | SERINE/THREONINE-PROTEIN KINASE 17 |
| XP_032872190.1 | UNCHARACTERIZED |
| XP_032872191.1 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| XP_032872192.1 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| XP_032872193.1 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| XP_032872194.1 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| XP_032872195.1 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| XP_032872196.1 | UFM1-SPECIFIC PROTEASE 2 |
| XP_032872197.1 | UFM1-SPECIFIC PROTEASE 2 |
| XP_032872198.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032872199.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |
| XP_032872200.1 | RPA-RELATED PROTEIN RADX |
| XP_032872201.1 | RPA-RELATED PROTEIN RADX |
| XP_032872202.1 | TRANSMEMBRANE PROTEIN 95 |
| XP_032872203.1 | TRANSMEMBRANE PROTEIN 95 |
| XP_032872204.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032872205.1 | C3ORF6 PROTEIN-RELATED |
| XP_032872206.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| XP_032872207.1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| XP_032872208.1 | UNCHARACTERIZED |
| XP_032872209.1 | WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER |
| XP_032872210.1 | |
| XP_032872211.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| XP_032872212.1 | |
| XP_032872213.1 | RH59310P |
| XP_032872214.1 | RH59310P |
| XP_032872215.1 | GRB10 INTERACTING GYF PROTEIN |
| XP_032872216.1 | GRB10 INTERACTING GYF PROTEIN |
| XP_032872217.1 | GRB10 INTERACTING GYF PROTEIN |
| XP_032872218.1 | GRB10 INTERACTING GYF PROTEIN |
| XP_032872219.1 | GRB10 INTERACTING GYF PROTEIN |
| XP_032872220.1 | GRB10 INTERACTING GYF PROTEIN |
