The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032871721.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032871722.1 | HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT |
| XP_032871723.1 | MYOSIN LIGHT CHAIN 1, 3 |
| XP_032871724.1 | MYOSIN LIGHT CHAIN 1, 3 |
| XP_032871725.1 | MYOSIN LIGHT CHAIN 1, 3 |
| XP_032871726.1 | TUBULIN |
| XP_032871727.1 | OS-9-RELATED |
| XP_032871728.1 | |
| XP_032871729.1 | LOQUACIOUS, ISOFORM B |
| XP_032871730.1 | LOQUACIOUS, ISOFORM B |
| XP_032871731.1 | ZINC FINGER PROTEIN |
| XP_032871732.1 | ZINC FINGER PROTEIN |
| XP_032871733.1 | ZINC FINGER PROTEIN |
| XP_032871734.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| XP_032871735.1 | BNIP - RELATED |
| XP_032871736.1 | RFX TRANSCRIPTION FACTOR FAMILY |
| XP_032871737.1 | SPROUTY |
| XP_032871738.1 | UNCHARACTERIZED |
| XP_032871739.1 | METHANETHIOL OXIDASE |
| XP_032871740.1 | GAMMA-SECRETASE SUBUNIT APH-1 |
| XP_032871741.1 | GAMMA-SECRETASE SUBUNIT APH-1 |
| XP_032871742.1 | CINGULIN-LIKE PROTEIN 1-RELATED |
| XP_032871743.1 | CINGULIN-LIKE PROTEIN 1-RELATED |
| XP_032871744.1 | AGAP004733-PA |
| XP_032871745.1 | SMAD |
| XP_032871746.1 | SMAD |
| XP_032871747.1 | SMAD |
| XP_032871748.1 | METALLOPROTEASE TLDD |
| XP_032871749.1 | SMAD |
| XP_032871750.1 | THREONINE SYNTHASE-LIKE 1 |
| XP_032871751.1 | SMAD |
| XP_032871752.1 | PERFORIN-1 |
| XP_032871753.1 | PERFORIN-1 |
| XP_032871754.1 | PERFORIN-1 |
| XP_032871755.1 | PERFORIN-1 |
| XP_032871756.1 | PERFORIN-1 |
| XP_032871757.1 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| XP_032871758.1 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| XP_032871759.1 | |
| XP_032871760.1 | SEMAPHORIN |
| XP_032871761.1 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
| XP_032871762.1 | INTEGRIN ALPHA |
| XP_032871763.1 | YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1 |
| XP_032871764.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032871765.1 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| XP_032871766.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| XP_032871767.1 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
| XP_032871768.1 | EXTRACELLULAR MATRIX PROTEIN 1 |
| XP_032871769.1 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED |
| XP_032871770.1 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
