The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032871771.1 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
| XP_032871772.1 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
| XP_032871773.1 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
| XP_032871774.1 | CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS |
| XP_032871775.1 | HORMA DOMAIN-CONTAINING PROTEIN 1 |
| XP_032871776.1 | TRANSCRIPTION FACTOR ONECUT |
| XP_032871777.1 | TRANS-GOLGI PROTEIN GMX33 |
| XP_032871778.1 | TRANS-GOLGI PROTEIN GMX33 |
| XP_032871779.1 | ENDOSULFINE |
| XP_032871780.1 | ENDOSULFINE |
| XP_032871781.1 | AGAP011099-PA |
| XP_032871782.1 | HEAVYWEIGHT, ISOFORM A |
| XP_032871783.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 24 |
| XP_032871784.1 | BNIP - RELATED |
| XP_032871785.1 | ANKYRIN REPEAT PROTEIN |
| XP_032871786.1 | ANKYRIN REPEAT PROTEIN |
| XP_032871787.1 | AGAP011099-PA |
| XP_032871788.1 | ANKYRIN REPEAT PROTEIN |
| XP_032871789.1 | TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT |
| XP_032871790.1 | CDC42 SMALL EFFECTOR PROTEIN HOMOLOG |
| XP_032871791.1 | CDC42 SMALL EFFECTOR PROTEIN HOMOLOG |
| XP_032871792.1 | CARBONIC ANHYDRASE |
| XP_032871793.1 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
| XP_032871794.1 | AGAP011099-PA |
| XP_032871795.1 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
| XP_032871796.1 | TROPOMYOSIN |
| XP_032871797.1 | TROPOMYOSIN |
| XP_032871798.1 | |
| XP_032871799.1 | |
| XP_032871800.1 | |
| XP_032871801.1 | C1ORF189 |
| XP_032871802.1 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
| XP_032871803.1 | AGAP011099-PA |
| XP_032871804.1 | EXTRACELLULAR MATRIX PROTEIN 1 |
| XP_032871805.1 | EXTRACELLULAR MATRIX PROTEIN 1 |
| XP_032871806.1 | ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 |
| XP_032871807.1 | GLUCOSYLCERAMIDASE |
| XP_032871808.1 | GLUCOSYLCERAMIDASE |
| XP_032871809.1 | CHROMATIN TARGET OF PRMT1 PROTEIN |
| XP_032871810.1 | CHROMATIN TARGET OF PRMT1 PROTEIN |
| XP_032871811.1 | AGAP011099-PA |
| XP_032871812.1 | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED |
| XP_032871813.1 | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED |
| XP_032871814.1 | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED |
| XP_032871815.1 | BCL-2 RELATED |
| XP_032871816.1 | SPROUTY |
| XP_032871817.1 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE |
| XP_032871818.1 | CHAPERONIN |
| XP_032871819.1 | AGAP011099-PA |
| XP_032871820.1 | SEMAPHORIN |
