Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00359510 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
| SKAU_T00359520 | PAIRED MESODERM HOMEOBOX PROTEIN 1-RELATED |
| SKAU_T00359530 | RAP GTPASE-ACTIVATING PROTEIN |
| SKAU_T00359540 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| SKAU_T00359550 | TUBULIN POLYGLUTAMYLASE |
| SKAU_T00359560 | RAS GTPASE-ACTIVATING PROTEINS |
| SKAU_T00359570 | |
| SKAU_T00359580 | |
| SKAU_T00359590 | |
| SKAU_T00359600 | |
| SKAU_T00359610 | |
| SKAU_T00359620 | |
| SKAU_T00359630 | DIVALENT CATION TOLERANCE CUTA-RELATED |
| SKAU_T00359640 | POLYCOMB-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00359650 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00359660 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00359670 | NETRIN/LAMININ-RELATED |
| SKAU_T00359680 | ALLOGRAFT INFLAMMATORY FACTOR-1 |
| SKAU_T00359690 | UNCHARACTERIZED |
| SKAU_T00359700 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
| SKAU_T00359710 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| SKAU_T00359720 | TORSIN |
| SKAU_T00359730 | |
| SKAU_T00359740 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| SKAU_T00359750 | 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
| SKAU_T00359760 | UNCHARACTERIZED |
| SKAU_T00359770 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
| SKAU_T00359780 | UNCHARACTERIZED |
| SKAU_T00359790 | OLFACTOMEDIN-RELATED |
| SKAU_T00359800 | |
| SKAU_T00359810 | COLLAGEN ALPHA |
| SKAU_T00359820 | |
| SKAU_T00359830 | SI:CH211-266K2.1 |
| SKAU_T00359840 | |
| SKAU_T00359850 | |
| SKAU_T00359860 | |
| SKAU_T00359870 | |
| SKAU_T00359880 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00359890 | |
| SKAU_T00359900 | |
| SKAU_T00359910 | |
| SKAU_T00359920 | |
| SKAU_T00359930 | MITOTIC-SPINDLE ORGANIZING PROTEIN 2A-RELATED |
| SKAU_T00359940 | |
| SKAU_T00359950 | SERINE/THREONINE-PROTEIN KINASE 17 |
| SKAU_T00359960 | |
| SKAU_T00359970 | FIVE-SPAN TRANSMEMBRANE PROTEIN M83 |
| SKAU_T00359980 | |
| SKAU_T00359990 | FIVE-SPAN TRANSMEMBRANE PROTEIN M83 |
| SKAU_T00360000 | COMPLEMENT COMPONENT C6 |
