Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00357510 | COMPLEXIN |
| SKAU_T00357520 | HOMEOBOX PROTEIN, PUTATIVE-RELATED |
| SKAU_T00357530 | GASTRIN-RELEASING PEPTIDE |
| SKAU_T00357540 | ZINC FINGER PROTEIN 532-RELATED |
| SKAU_T00357550 | |
| SKAU_T00357560 | CLASP |
| SKAU_T00357570 | ALPHA-PROTEIN KINASE 2-RELATED |
| SKAU_T00357580 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| SKAU_T00357590 | CYTOKINE RECEPTOR |
| SKAU_T00357600 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
| SKAU_T00357610 | DNAJ HOMOLOG SUBFAMILY C MEMBER 21 |
| SKAU_T00357620 | RIBOSOME BIOGENESIS PROTEIN BRIX |
| SKAU_T00357630 | SEMAPHORIN |
| SKAU_T00357640 | |
| SKAU_T00357650 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
| SKAU_T00357660 | SHC TRANSFORMING PROTEIN |
| SKAU_T00357670 | |
| SKAU_T00357680 | AGAP004733-PA |
| SKAU_T00357690 | |
| SKAU_T00357700 | |
| SKAU_T00357710 | EIF4G DOMAIN PROTEIN |
| SKAU_T00357720 | |
| SKAU_T00357730 | SMAD |
| SKAU_T00357740 | DYMECLIN |
| SKAU_T00357750 | ADDUCIN |
| SKAU_T00357760 | NOP14 |
| SKAU_T00357770 | GLIAL FIBRILLARY ACIDIC PROTEIN |
| SKAU_T00357780 | SYNUCLEIN |
| SKAU_T00357790 | |
| SKAU_T00357800 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00357810 | UV EXCISION REPAIR PROTEIN RAD23 |
| SKAU_T00357820 | ZINC FINGER PROTEIN |
| SKAU_T00357830 | TRIMERIC INTRACELLULAR CATION CHANNEL |
| SKAU_T00357840 | SERINE/THREONINE PROTEIN KINASE |
| SKAU_T00357850 | ORNITHINE DECARBOXYLASE ANTIZYME |
| SKAU_T00357860 | GLYCINE DEHYDROGENASE, DECARBOXYLATING |
| SKAU_T00357870 | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED |
| SKAU_T00357880 | RIKEN CDNA 9930021J03 GENE |
| SKAU_T00357890 | MELANOMA ANTIGEN RECOGNIZED BY T-CELLS 1 |
| SKAU_T00357900 | METALLOPEPTIDASE M28 FAMILY MEMBER |
| SKAU_T00357910 | RAB6A-GEF COMPLEX PARTNER PROTEIN 1 |
| SKAU_T00357920 | T-LYMPHOCYTE ACTIVATION ANTIGEN |
| SKAU_T00357930 | ILGF DOMAIN-CONTAINING PROTEIN |
| SKAU_T00357940 | TYROSINE-PROTEIN KINASE HOPSCOTCH |
| SKAU_T00357950 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| SKAU_T00357960 | NUCLEOTIDE KINASE |
| SKAU_T00357970 | CDC37-RELATED |
| SKAU_T00357980 | 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00357990 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| SKAU_T00358000 | PROTEIN AMBP |
