Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00358010 | LIPOCALIN |
| SKAU_T00358020 | |
| SKAU_T00358030 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| SKAU_T00358040 | PROTEIN FAM163B MEMBER |
| SKAU_T00358050 | DOPAMINE BETA HYDROXYLASE RELATED |
| SKAU_T00358060 | SARCOSINE DEHYDROGENASE-RELATED |
| SKAU_T00358070 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| SKAU_T00358080 | RURM1 PROTEIN |
| SKAU_T00358090 | BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN |
| SKAU_T00358100 | |
| SKAU_T00358110 | |
| SKAU_T00358120 | |
| SKAU_T00358130 | |
| SKAU_T00358140 | |
| SKAU_T00358150 | |
| SKAU_T00358160 | |
| SKAU_T00358170 | |
| SKAU_T00358180 | ZINC FINGER RNA-BINDING PROTEIN |
| SKAU_T00358190 | |
| SKAU_T00358200 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00358210 | |
| SKAU_T00358220 | RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| SKAU_T00358230 | ZINC FINGER PROTEIN |
| SKAU_T00358240 | INTERMEDIATE FILAMENT |
| SKAU_T00358250 | |
| SKAU_T00358260 | |
| SKAU_T00358270 | NADH-UBIQUINONE OXIDOREDUCTASE |
| SKAU_T00358280 | MORN REPEAT-CONTAINING PROTEIN 5 |
| SKAU_T00358290 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00358300 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
| SKAU_T00358310 | RIBOSOME RECYCLING FACTOR |
| SKAU_T00358320 | PROSTAGLANDIN G/H SYNTHASE |
| SKAU_T00358330 | PHOSDUCIN-LIKE PROTEIN |
| SKAU_T00358340 | 60S RIBOSOMAL PROTEIN L28 |
| SKAU_T00358350 | E3 UBIQUITIN-PROTEIN LIGASE UBR5 |
| SKAU_T00358360 | METALLOPROTEASE |
| SKAU_T00358370 | 72 KDA INOSITOL POLYPHOSPHATE 5-PHOSPHATASE |
| SKAU_T00358380 | RGPR-RELATED |
| SKAU_T00358390 | |
| SKAU_T00358400 | |
| SKAU_T00358410 | |
| SKAU_T00358420 | |
| SKAU_T00358430 | |
| SKAU_T00358440 | |
| SKAU_T00358450 | CRUMBS FAMILY MEMBER |
| SKAU_T00358460 | UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00358470 | UNCHARACTERIZED |
| SKAU_T00358480 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
| SKAU_T00358490 | KELCH PROTEIN |
| SKAU_T00358500 |
