Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00357010 | THAP DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00357020 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
| SKAU_T00357030 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00357040 | INTRAFLAGELLAR TRANSPORT PROTEIN 74 HOMOLOG |
| SKAU_T00357050 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 LRRC19 FAMILY MEMBER |
| SKAU_T00357060 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00357070 | FUKUTIN-RELATED |
| SKAU_T00357080 | EG:EG0003.4 PROTEIN-RELATED |
| SKAU_T00357090 | TYROSINE-PROTEIN KINASE |
| SKAU_T00357100 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| SKAU_T00357110 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00357120 | FUKUTIN-RELATED |
| SKAU_T00357130 | EG:EG0003.4 PROTEIN-RELATED |
| SKAU_T00357140 | |
| SKAU_T00357150 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| SKAU_T00357160 | PERIOSTIN-RELATED |
| SKAU_T00357170 | |
| SKAU_T00357180 | |
| SKAU_T00357190 | RABCONNECTIN-3B, ISOFORM A |
| SKAU_T00357200 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| SKAU_T00357210 | TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C |
| SKAU_T00357220 | CYCLINS |
| SKAU_T00357230 | CYCLINS |
| SKAU_T00357240 | UNCHARACTERIZED |
| SKAU_T00357250 | APICAL PROTEIN/SHROOM-RELATED |
| SKAU_T00357260 | STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00357270 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
| SKAU_T00357280 | LIVER EXPRESSED ANTIMICROBIAL PEPTIDE 2 |
| SKAU_T00357290 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
| SKAU_T00357300 | NUCLEOPORIN P54 |
| SKAU_T00357310 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| SKAU_T00357320 | |
| SKAU_T00357330 | |
| SKAU_T00357340 | AF4/FMR2 FAMILY MEMBER |
| SKAU_T00357350 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| SKAU_T00357360 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| SKAU_T00357370 | KELCH PROTEIN |
| SKAU_T00357380 | TRANSMEMBRANE PROTEIN 144 |
| SKAU_T00357390 | HSDA/SDA1-RELATED |
| SKAU_T00357400 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13 |
| SKAU_T00357410 | MITOGEN-ACTIVATED PROTEIN KINASE |
| SKAU_T00357420 | MITOGEN-ACTIVATED PROTEIN KINASE |
| SKAU_T00357430 | SPERMATHECAL PHYSIOLOGY VARIANT |
| SKAU_T00357440 | ENDOTHELIAL CELL-SPECIFIC MOLECULE 1 ESM-1 |
| SKAU_T00357450 | |
| SKAU_T00357460 | BTK-BINDING PROTEIN-RELATED |
| SKAU_T00357470 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| SKAU_T00357480 | I[[H]] CHANNEL, ISOFORM E |
| SKAU_T00357490 | COLLAGEN ALPHA |
| SKAU_T00357500 | VESICULAR MANNOSE-BINDING LECTIN |
