About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_866-3.7
Bpl_scaf_866-4.10OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_866-4.11OLIGORIBONUCLEASE, MITOCHONDRIAL
Bpl_scaf_866-4.12METHIONYL-TRNA FORMYLTRANSFERASE
Bpl_scaf_866-4.13
Bpl_scaf_866-4.14DRAB11-RELATED
Bpl_scaf_866-4.15
Bpl_scaf_8670-0.10ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
Bpl_scaf_8670-0.12CEREBELLIN-RELATED
Bpl_scaf_8670-0.13DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Bpl_scaf_8670-0.8BONUS, ISOFORM C-RELATED
Bpl_scaf_8670-0.9T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Bpl_scaf_8685-0.0
Bpl_scaf_869-0.0MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Bpl_scaf_8695-0.0
Bpl_scaf_8695-0.17THREE PRIME REPAIR EXONUCLEASE 1, 2
Bpl_scaf_8695-0.2
Bpl_scaf_8695-0.21RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_8705-0.0EPIMERASE-RELATED
Bpl_scaf_8705-0.1
Bpl_scaf_8705-0.12
Bpl_scaf_8705-0.22PROTEIN STAR
Bpl_scaf_8705-0.26
Bpl_scaf_8718-0.3
Bpl_scaf_8718-0.4
Bpl_scaf_8718-0.5
Bpl_scaf_8718-0.9MOLTING PROTEIN MLT-4
Bpl_scaf_8718-1.5N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_8718-1.6N-ACETYLGALACTOSAMINYLTRANSFERASE
Bpl_scaf_8724-0.4LIN-24 (TWENTY-FOUR) LIKE
Bpl_scaf_8724-1.4
Bpl_scaf_8724-1.5
Bpl_scaf_8724-1.9
Bpl_scaf_8733-0.0
Bpl_scaf_8733-1.1
Bpl_scaf_8733-1.11
Bpl_scaf_8733-1.12
Bpl_scaf_8733-1.2
Bpl_scaf_8733-1.5
Bpl_scaf_8738-0.10
Bpl_scaf_8738-0.11
Bpl_scaf_8738-1.24
Bpl_scaf_8738-1.25
Bpl_scaf_8738-1.27
Bpl_scaf_8749-0.0
Bpl_scaf_8753-0.0
Bpl_scaf_8753-0.10PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_8753-0.4
Bpl_scaf_8753-0.8PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_8753-0.9PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
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