The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032899121.1 | BCL7 RELATED |
| XP_032899122.1 | BCL7 RELATED |
| XP_032899123.1 | WD-40 REPEAT PROTEIN |
| XP_032899124.1 | WD-40 REPEAT PROTEIN |
| XP_032899125.1 | WD-40 REPEAT PROTEIN |
| XP_032899126.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 |
| XP_032899127.1 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 |
| XP_032899128.1 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 |
| XP_032899129.1 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 |
| XP_032899130.1 | RHO FAMILY GTPASE |
| XP_032899131.1 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
| XP_032899132.1 | TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA |
| XP_032899133.1 | MORN REPEAT-CONTAINING PROTEIN 3 |
| XP_032899134.1 | MORN REPEAT-CONTAINING PROTEIN 3 |
| XP_032899135.1 | MORN REPEAT-CONTAINING PROTEIN 3 |
| XP_032899136.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032899137.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032899138.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032899139.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032899140.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032899141.1 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
| XP_032899142.1 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
| XP_032899143.1 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
| XP_032899144.1 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
| XP_032899145.1 | LONGIN DOMAIN-CONTAINING PROTEIN |
| XP_032899146.1 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING |
| XP_032899147.1 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING |
| XP_032899148.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 |
| XP_032899149.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 |
| XP_032899150.1 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 5 |
| XP_032899151.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| XP_032899152.1 | LONGIN DOMAIN-CONTAINING PROTEIN |
| XP_032899153.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| XP_032899154.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| XP_032899155.1 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
| XP_032899156.1 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
| XP_032899157.1 | P2X PURINOCEPTOR |
| XP_032899158.1 | P2X PURINOCEPTOR |
| XP_032899159.1 | INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG |
| XP_032899160.1 | INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG |
| XP_032899161.1 | CALCIUM-TRANSPORTING ATPASE |
| XP_032899162.1 | CELL DIVISION CYCLE 16,23,27 |
| XP_032899163.1 | CELL DIVISION CYCLE 16,23,27 |
| XP_032899164.1 | LONGIN DOMAIN-CONTAINING PROTEIN |
| XP_032899165.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032899166.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032899167.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032899168.1 | ARP2/3 COMPLEX 21 KD SUBUNIT |
| XP_032899169.1 | XPA-BINDING PROTEIN 1-RELATED |
| XP_032899170.1 | VACUOLAR SORTING PROTEIN VPS29 |
