The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032899021.1 | T-BOX PROTEIN-RELATED |
| XP_032899022.1 | T-BOX PROTEIN-RELATED |
| XP_032899023.1 | T-BOX PROTEIN-RELATED |
| XP_032899024.1 | T-BOX PROTEIN-RELATED |
| XP_032899025.1 | LIM/HOMEOBOX PROTEIN LHX |
| XP_032899026.1 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| XP_032899027.1 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| XP_032899028.1 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| XP_032899029.1 | CALCINEURIN B HOMOLOGOUS PROTEIN 3 |
| XP_032899030.1 | SI:DKEY-261L7.2 |
| XP_032899031.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| XP_032899032.1 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| XP_032899033.1 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
| XP_032899034.1 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
| XP_032899035.1 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
| XP_032899036.1 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
| XP_032899037.1 | PHOSPHOLIPASE B-RELATED |
| XP_032899038.1 | IQ DOMAIN-CONTAINING PROTEIN D |
| XP_032899039.1 | IQ DOMAIN-CONTAINING PROTEIN D |
| XP_032899040.1 | IQ DOMAIN-CONTAINING PROTEIN D |
| XP_032899041.1 | UNCHARACTERIZED |
| XP_032899042.1 | UNCHARACTERIZED |
| XP_032899043.1 | RBPJ-INTERACTING AND TUBULIN-ASSOCIATED PROTEIN 1 |
| XP_032899044.1 | RBPJ-INTERACTING AND TUBULIN-ASSOCIATED PROTEIN 1 |
| XP_032899045.1 | NIPSNAP-RELATED |
| XP_032899046.1 | CALCIUM-BINDING PROTEIN 8-RELATED |
| XP_032899047.1 | NUCLEASE-RELATED |
| XP_032899048.1 | NUCLEASE-RELATED |
| XP_032899049.1 | NUCLEASE-RELATED |
| XP_032899050.1 | NUCLEASE-RELATED |
| XP_032899051.1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX, SUBUNIT X |
| XP_032899052.1 | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 |
| XP_032899053.1 | ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 |
| XP_032899054.1 | ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 |
| XP_032899055.1 | MYOTUBULARIN-RELATED |
| XP_032899056.1 | MYOTUBULARIN-RELATED |
| XP_032899057.1 | MYOTUBULARIN-RELATED |
| XP_032899058.1 | MYOTUBULARIN-RELATED |
| XP_032899059.1 | MYOTUBULARIN-RELATED |
| XP_032899060.1 | MYOTUBULARIN-RELATED |
| XP_032899061.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032899062.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032899063.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032899064.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032899065.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032899066.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032899067.1 | FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145 |
| XP_032899068.1 | SEC61 SUBUNIT BETA |
| XP_032899069.1 | FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145 |
| XP_032899070.1 | IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG |
