The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032898971.1 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
| XP_032898972.1 | BAT4 PROTEIN-RELATED |
| XP_032898973.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032898974.1 | SEPIAPTERIN REDUCTASE |
| XP_032898975.1 | |
| XP_032898976.1 | SOLUTE CARRIER FAMILY 35 |
| XP_032898977.1 | SOLUTE CARRIER FAMILY 35 |
| XP_032898978.1 | AP1 GAMMA SUBUNIT BINDING PROTEIN 1 |
| XP_032898979.1 | SYNTAXIN |
| XP_032898980.1 | MUCIN 4-RELATED |
| XP_032898981.1 | MUCIN 4-RELATED |
| XP_032898982.1 | KREMEN PROTEIN |
| XP_032898983.1 | RING ZINC FINGER |
| XP_032898984.1 | RING ZINC FINGER |
| XP_032898985.1 | RING ZINC FINGER |
| XP_032898986.1 | X-BOX BINDING PROTEIN 1 |
| XP_032898987.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 60 |
| XP_032898988.1 | SYNTAXIN |
| XP_032898989.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 60 |
| XP_032898990.1 | HEAT SHOCK PROTEIN BETA-8 |
| XP_032898991.1 | SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED |
| XP_032898992.1 | SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED |
| XP_032898993.1 | HEAT SHOCK PROTEIN BETA-8 |
| XP_032898994.1 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
| XP_032898995.1 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
| XP_032898996.1 | |
| XP_032898997.1 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| XP_032898998.1 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| XP_032898999.1 | NITRIC OXIDE SYNTHASE OXYGENASE |
| XP_032899000.1 | NITRIC OXIDE SYNTHASE OXYGENASE |
| XP_032899001.1 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| XP_032899002.1 | SERINE-THREONINE PROTEIN KINASE |
| XP_032899003.1 | WD40 REPEAT PROTEIN |
| XP_032899004.1 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| XP_032899005.1 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| XP_032899006.1 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT |
| XP_032899007.1 | NEPHRIN |
| XP_032899008.1 | WD40 REPEAT PROTEIN 12, 37 |
| XP_032899009.1 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
| XP_032899010.1 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
| XP_032899011.1 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
| XP_032899012.1 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
| XP_032899013.1 | UNCHARACTERIZED |
| XP_032899014.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032899015.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 |
| XP_032899016.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 |
| XP_032899017.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 |
| XP_032899018.1 | T-BOX PROTEIN-RELATED |
| XP_032899019.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032899020.1 | T-BOX PROTEIN-RELATED |
