The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032896771.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896772.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896773.1 | IRE1-RELATED |
| XP_032896774.1 | IRE1-RELATED |
| XP_032896775.1 | IRE1-RELATED |
| XP_032896776.1 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 |
| XP_032896777.1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| XP_032896778.1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| XP_032896779.1 | B-BOX DOMAIN CONTAINING |
| XP_032896780.1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| XP_032896781.1 | GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN |
| XP_032896782.1 | GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN |
| XP_032896783.1 | SOLUTE CARRIER FAMILY 2 |
| XP_032896784.1 | GDNF RECEPTOR ALPHA |
| XP_032896785.1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| XP_032896786.1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| XP_032896787.1 | SERINE/THREONINE-PROTEIN KINASE PLK |
| XP_032896788.1 | GLUTAMATE--TRNA LIGASE |
| XP_032896789.1 | GLUTAMATE--TRNA LIGASE |
| XP_032896790.1 | ET TRANSLATION PRODUCT-RELATED |
| XP_032896791.1 | UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 |
| XP_032896792.1 | DYNACTIN SUBUNIT 5 |
| XP_032896793.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032896794.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032896795.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| XP_032896796.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| XP_032896797.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| XP_032896798.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| XP_032896799.1 | NON-SMC ELEMENT 1-RELATED |
| XP_032896800.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| XP_032896801.1 | NON-SMC ELEMENT 1-RELATED |
| XP_032896802.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032896803.1 | CYTOKINE RECEPTOR |
| XP_032896804.1 | CYTOKINE RECEPTOR |
| XP_032896805.1 | CYTOKINE RECEPTOR |
| XP_032896806.1 | CYTOKINE RECEPTOR |
| XP_032896807.1 | POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN |
| XP_032896808.1 | POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN |
| XP_032896809.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032896810.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032896811.1 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032896812.1 | RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG |
| XP_032896813.1 | RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG |
| XP_032896814.1 | RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG |
| XP_032896815.1 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| XP_032896816.1 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| XP_032896817.1 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| XP_032896818.1 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| XP_032896819.1 | PROKARYOTIC DNA TOPOISOMERASE |
| XP_032896820.1 | PROKARYOTIC DNA TOPOISOMERASE |
