The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032896621.1 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| XP_032896622.1 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| XP_032896623.1 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| XP_032896624.1 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| XP_032896625.1 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| XP_032896626.1 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| XP_032896627.1 | RETINOBLASTOMA-BINDING PROTEIN 6 |
| XP_032896628.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| XP_032896629.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032896630.1 | RIBOSOMAL PROTEIN S6 KINASE |
| XP_032896631.1 | LEUCINE CARBOXYL METHYLTRANSFERASE |
| XP_032896632.1 | LEUCINE CARBOXYL METHYLTRANSFERASE |
| XP_032896633.1 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| XP_032896634.1 | 3BP-1 RELATED RHOGAP |
| XP_032896635.1 | 3BP-1 RELATED RHOGAP |
| XP_032896636.1 | 3BP-1 RELATED RHOGAP |
| XP_032896637.1 | 3BP-1 RELATED RHOGAP |
| XP_032896638.1 | 3BP-1 RELATED RHOGAP |
| XP_032896639.1 | 3BP-1 RELATED RHOGAP |
| XP_032896640.1 | SOLUTE CARRIER FAMILY 5 |
| XP_032896641.1 | SOLUTE CARRIER FAMILY 5 |
| XP_032896642.1 | SOLUTE CARRIER FAMILY 5 |
| XP_032896643.1 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| XP_032896644.1 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
| XP_032896645.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032896646.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032896647.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032896648.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032896649.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032896650.1 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| XP_032896651.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032896652.1 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| XP_032896653.1 | DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1 |
| XP_032896654.1 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| XP_032896655.1 | UNCHARACTERIZED |
| XP_032896656.1 | UNCHARACTERIZED |
| XP_032896657.1 | UNCHARACTERIZED |
| XP_032896658.1 | UNCHARACTERIZED |
| XP_032896659.1 | UNCHARACTERIZED |
| XP_032896660.1 | UNCHARACTERIZED |
| XP_032896661.1 | G BETA-LIKE PROTEIN GBL |
| XP_032896662.1 | CARDIOLIPIN HYDROLASE |
| XP_032896663.1 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
| XP_032896664.1 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
| XP_032896665.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896666.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896667.1 | ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR |
| XP_032896668.1 | ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR |
| XP_032896669.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
| XP_032896670.1 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
