The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032896421.1 | CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19 |
| XP_032896422.1 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
| XP_032896423.1 | ARF-GAP WITH DUAL PH DOMAIN-CONTAINING PROTEIN 1-LIKE PROTEIN |
| XP_032896424.1 | UNCHARACTERIZED |
| XP_032896425.1 | UNCHARACTERIZED |
| XP_032896426.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896427.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896428.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896429.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896430.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896431.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896432.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032896433.1 | FTP DOMAIN-CONTAINING PROTEIN |
| XP_032896434.1 | DYNEIN ASSEMBLY FACTOR 5, AXONEMAL |
| XP_032896435.1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| XP_032896436.1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| XP_032896437.1 | PLATELET-DERIVED GROWTH FACTOR |
| XP_032896438.1 | PLATELET-DERIVED GROWTH FACTOR |
| XP_032896439.1 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| XP_032896440.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032896441.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032896442.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032896443.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032896444.1 | MELANOCYTE PROTEIN PMEL 17-RELATED |
| XP_032896445.1 | PENTRAXIN |
| XP_032896446.1 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| XP_032896447.1 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| XP_032896448.1 | BRAIN PROTEIN I3 |
| XP_032896449.1 | BRAIN PROTEIN I3 |
| XP_032896450.1 | DYSFERLIN-RELATED |
| XP_032896451.1 | SERINE/THREONINE-PROTEIN KINASE LMTK1 |
| XP_032896452.1 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| XP_032896453.1 | PARVALBUMIN ALPHA |
| XP_032896454.1 | PARVALBUMIN ALPHA |
| XP_032896455.1 | RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED |
| XP_032896456.1 | RADIAL SPOKE HEAD 10 HOMOLOG B-RELATED |
| XP_032896457.1 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
| XP_032896458.1 | DISCS LARGE |
| XP_032896459.1 | UNCHARACTERIZED |
| XP_032896460.1 | UNCHARACTERIZED |
| XP_032896461.1 | UNCHARACTERIZED |
| XP_032896462.1 | UNCHARACTERIZED |
| XP_032896463.1 | AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN |
| XP_032896464.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896465.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896466.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896467.1 | DISCS LARGE |
| XP_032896468.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896469.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032896470.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
