The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032896521.1 | CALPAIN |
| XP_032896522.1 | CALPAIN |
| XP_032896523.1 | AP-5 COMPLEX SUBUNIT SIGMA-1 |
| XP_032896524.1 | CALPAIN |
| XP_032896525.1 | CALPAIN |
| XP_032896526.1 | CALPAIN |
| XP_032896527.1 | MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE |
| XP_032896528.1 | ENVOPLAKIN |
| XP_032896529.1 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| XP_032896530.1 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| XP_032896531.1 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| XP_032896532.1 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| XP_032896533.1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| XP_032896534.1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| XP_032896535.1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| XP_032896536.1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| XP_032896537.1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| XP_032896538.1 | TRANSMEMBRANE GTPASE FZO |
| XP_032896539.1 | TRANSMEMBRANE GTPASE FZO |
| XP_032896540.1 | TRANSMEMBRANE GTPASE FZO |
| XP_032896541.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| XP_032896542.1 | ADENYLATE CYCLASE TYPE 1 |
| XP_032896543.1 | ADENYLATE CYCLASE TYPE 1 |
| XP_032896544.1 | CBP/P300-RELATED |
| XP_032896545.1 | CBP/P300-RELATED |
| XP_032896546.1 | CBP/P300-RELATED |
| XP_032896547.1 | CBP/P300-RELATED |
| XP_032896548.1 | CBP/P300-RELATED |
| XP_032896549.1 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| XP_032896550.1 | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT |
| XP_032896551.1 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
| XP_032896552.1 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
| XP_032896553.1 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
| XP_032896554.1 | VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 |
| XP_032896555.1 | CORONIN |
| XP_032896556.1 | AGAP008170-PA |
| XP_032896557.1 | TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER |
| XP_032896558.1 | TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER |
| XP_032896559.1 | TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER |
| XP_032896560.1 | TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER |
| XP_032896561.1 | DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL |
| XP_032896562.1 | DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL |
| XP_032896563.1 | DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL |
| XP_032896564.1 | HEME OXYGENASE |
| XP_032896565.1 | HEME OXYGENASE |
| XP_032896566.1 | HEME OXYGENASE |
| XP_032896567.1 | HEME OXYGENASE |
| XP_032896568.1 | HEME OXYGENASE |
| XP_032896569.1 | RIBONUCLEIC ACID BINDING PROTEIN S1 |
| XP_032896570.1 | EXPORTIN-6 |
