The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032896921.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 9 |
| XP_032896922.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032896923.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032896924.1 | FRINGE-RELATED |
| XP_032896925.1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| XP_032896926.1 | TWEETY-RELATED |
| XP_032896927.1 | TWEETY-RELATED |
| XP_032896928.1 | TWEETY-RELATED |
| XP_032896929.1 | CENTROMERE PROTEIN E |
| XP_032896930.1 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
| XP_032896931.1 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
| XP_032896932.1 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
| XP_032896933.1 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
| XP_032896934.1 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
| XP_032896935.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED |
| XP_032896936.1 | PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED |
| XP_032896937.1 | ZINC FINGER PROTEIN 598 |
| XP_032896938.1 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
| XP_032896939.1 | SYNAPTOGYRIN |
| XP_032896940.1 | SYNAPTOGYRIN |
| XP_032896941.1 | ALR/ERV |
| XP_032896942.1 | SH3 MULTIPLE DOMAIN |
| XP_032896943.1 | SH3 MULTIPLE DOMAIN |
| XP_032896944.1 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
| XP_032896945.1 | TRANSDUCIN BETA-LIKE 3 |
| XP_032896946.1 | SH3 MULTIPLE DOMAIN |
| XP_032896947.1 | 60S RIBOSOMAL PROTEIN L3-RELATED |
| XP_032896948.1 | 60S RIBOSOMAL PROTEIN L3-RELATED |
| XP_032896949.1 | 60S RIBOSOMAL PROTEIN L3-RELATED |
| XP_032896950.1 | RIBOSOMAL S SUBUNIT |
| XP_032896951.1 | NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT |
| XP_032896952.1 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
| XP_032896953.1 | TEX2 PROTEIN-RELATED |
| XP_032896954.1 | METHIONINE-R-SULFOXIDE REDUCTASE B1 |
| XP_032896955.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| XP_032896956.1 | UNCHARACTERIZED |
| XP_032896957.1 | NITRATE, FORMATE, IRON DEHYDROGENASE |
| XP_032896958.1 | NITRATE, FORMATE, IRON DEHYDROGENASE |
| XP_032896959.1 | BETA LACTAMASE DOMAIN |
| XP_032896960.1 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
| XP_032896961.1 | BETA LACTAMASE DOMAIN |
| XP_032896962.1 | ACYLPYRUVASE |
| XP_032896963.1 | STEREOCILIN RELATED |
| XP_032896964.1 | STEREOCILIN RELATED |
| XP_032896965.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| XP_032896966.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| XP_032896967.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| XP_032896968.1 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
| XP_032896969.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| XP_032896970.1 | GUANINE NUCLEOTIDE-BINDING PROTEIN G I /G S /G O GAMMA-13 SUBUNIT |
