About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g12428
Chiridota_g12429UNCHARACTERIZED
Chiridota_g1243WD40 REPEAT PROTEIN 12, 37
Chiridota_g12430UNCHARACTERIZED
Chiridota_g12431MIP08469P
Chiridota_g12432MIP08469P
Chiridota_g12433
Chiridota_g12434
Chiridota_g12435ARFAPTIN-RELATED
Chiridota_g12436
Chiridota_g12437TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
Chiridota_g12438
Chiridota_g12439IRE1-RELATED
Chiridota_g1244UNCHARACTERIZED
Chiridota_g12440
Chiridota_g12441
Chiridota_g12442CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g12443IG-LIKE DOMAIN-CONTAINING PROTEIN
Chiridota_g12444
Chiridota_g12445
Chiridota_g12446
Chiridota_g12447
Chiridota_g12448INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g12449PROTEIN CBG23764
Chiridota_g1245
Chiridota_g12450SCAVENGER RECEPTOR DOMAIN-CONTAINING
Chiridota_g12451SRCR DOMAIN-CONTAINING PROTEIN
Chiridota_g12452
Chiridota_g12453
Chiridota_g12454
Chiridota_g12455
Chiridota_g12456
Chiridota_g12457ADHESION G-PROTEIN COUPLED RECEPTOR
Chiridota_g12458
Chiridota_g12459SCAVENGER RECEPTOR DOMAIN-CONTAINING
Chiridota_g1246
Chiridota_g12460SRCR DOMAIN-CONTAINING PROTEIN
Chiridota_g12461
Chiridota_g12462ADHESION G-PROTEIN COUPLED RECEPTOR
Chiridota_g12463SRCR DOMAIN-CONTAINING PROTEIN
Chiridota_g12464
Chiridota_g12465ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g12466TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Chiridota_g12467TRANSCRIPTION INITIATION FACTOR IA RRN3
Chiridota_g12468
Chiridota_g12469ATP-BINDING CASSETTE SUB-FAMILY B
Chiridota_g1247UNCHARACTERIZED
Chiridota_g12470ATP-BINDING CASSETTE SUB-FAMILY B
Chiridota_g12471
Chiridota_g12472L1 TRANSPOSABLE ELEMENT-RELATED
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