About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g12383
Chiridota_g12384
Chiridota_g12385
Chiridota_g12386PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Chiridota_g12387
Chiridota_g12388
Chiridota_g12389
Chiridota_g1239GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP
Chiridota_g12390
Chiridota_g12391
Chiridota_g12392PROTEIN CBG26694
Chiridota_g12393
Chiridota_g12394
Chiridota_g12395
Chiridota_g12396
Chiridota_g12397UNCHARACTERIZED
Chiridota_g12398REGULATORY-ASSOCIATED PROTEIN OF MTOR
Chiridota_g1239930S 40S RIBOSOMAL PROTEIN
Chiridota_g124
Chiridota_g1240SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN
Chiridota_g12400ADHESION G PROTEIN-COUPLED RECEPTOR G7
Chiridota_g12401ADHESION G PROTEIN-COUPLED RECEPTOR G7
Chiridota_g12402
Chiridota_g12403PROTEIN FAM167A
Chiridota_g12404CYTOKINE RECEPTOR
Chiridota_g12405
Chiridota_g12406
Chiridota_g12407
Chiridota_g12408
Chiridota_g12409
Chiridota_g1241PROTEIN FAM72A-RELATED
Chiridota_g12410
Chiridota_g12411BRAIN PROTEIN I3
Chiridota_g12412DUF3504 DOMAIN-CONTAINING PROTEIN
Chiridota_g12413
Chiridota_g12414
Chiridota_g12415
Chiridota_g12416
Chiridota_g12417
Chiridota_g12418
Chiridota_g12419
Chiridota_g1242RIBITOL-5-PHOSPHATE XYLOSYLTRANSFERASE 1
Chiridota_g12420
Chiridota_g12421CYCLINS
Chiridota_g12422PROTEIN HID1
Chiridota_g12423CENTROSOMAL PROTEIN OF 131 KDA
Chiridota_g12424CCR4 NOT-RELATED
Chiridota_g12425TNF RECEPTOR ASSOCIATED FACTOR
Chiridota_g12426
Chiridota_g12427EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7
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