About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g12293ATP-DEPENDENT RNA HELICASE DBP3
Chiridota_g12294ALR/ERV
Chiridota_g12295
Chiridota_g12296DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Chiridota_g12297RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
Chiridota_g12298ANKYRIN REPEAT DOMAIN 40
Chiridota_g12299
Chiridota_g123IKB KINASE
Chiridota_g1230
Chiridota_g12300
Chiridota_g12301
Chiridota_g12302RHO FAMILY GTPASE
Chiridota_g12303RHO FAMILY GTPASE
Chiridota_g12304
Chiridota_g12305
Chiridota_g12306
Chiridota_g12307
Chiridota_g12308-
Chiridota_g12309
Chiridota_g1231UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Chiridota_g12310
Chiridota_g12311
Chiridota_g12312
Chiridota_g12313SOX100B
Chiridota_g12314PUTATIVE-RELATED
Chiridota_g12315
Chiridota_g12316
Chiridota_g12317
Chiridota_g12318
Chiridota_g12319ZINC FINGER PROTEIN 598
Chiridota_g1232SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED
Chiridota_g12320ALPHA- 1,3 -FUCOSYLTRANSFERASE
Chiridota_g12321
Chiridota_g12322ALPHA- 1,3 -FUCOSYLTRANSFERASE
Chiridota_g12323
Chiridota_g12324WW DOMAIN BINDING PROTEIN 2, ISOFORM E
Chiridota_g12325TRANSMEMBRANE PROTEIN 220
Chiridota_g12326ER LUMEN PROTEIN RETAINING RECEPTOR
Chiridota_g12327
Chiridota_g12328
Chiridota_g12329N-LINKED OLIGOSACCHARIDE PROCESSING
Chiridota_g1233
Chiridota_g12330HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Chiridota_g12331SERINE/THREONINE-PROTEIN KINASE SBK1
Chiridota_g12332SYNAPTOTAGMIN
Chiridota_g12333UNCHARACTERIZED
Chiridota_g12334BETA-1,4-GALACTOSYLTRANSFERASE
Chiridota_g12335TRANSLATION FACTOR
Chiridota_g12336COENZYME Q10 BIOSYNTHESIS PROTEIN 7
Chiridota_g12337
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