About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g12158L1 TRANSPOSABLE ELEMENT-RELATED
Chiridota_g12159
Chiridota_g1216HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Chiridota_g12160
Chiridota_g12161
Chiridota_g12162
Chiridota_g12163
Chiridota_g12164
Chiridota_g12165
Chiridota_g12166ENDONUCLEASE-RELATED
Chiridota_g12167ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g12168
Chiridota_g12169PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Chiridota_g1217
Chiridota_g12170
Chiridota_g12171
Chiridota_g12172
Chiridota_g12173
Chiridota_g12174
Chiridota_g12175
Chiridota_g12176
Chiridota_g12177
Chiridota_g12178
Chiridota_g12179
Chiridota_g1218GLYCOSYLTRANSFERASE-RELATED
Chiridota_g12180
Chiridota_g12181SNF2/RAD54 FAMILY MEMBER
Chiridota_g12182PORCUPINE
Chiridota_g12183ACYL-COENZYME A SYNTHETASE
Chiridota_g12184
Chiridota_g12185ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 2
Chiridota_g12186PROTEIN BUD31-RELATED
Chiridota_g12187PROTEIN BUD31-RELATED
Chiridota_g12188DYNEIN HEAVY CHAIN
Chiridota_g12189L1 TRANSPOSABLE ELEMENT-RELATED
Chiridota_g1219ACYL-COA DEHYDROGENASE
Chiridota_g12190HAD SUPERFAMILY MEMBERS CMAS AND KDSC
Chiridota_g12191
Chiridota_g12192RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Chiridota_g12193
Chiridota_g12194CDP-DIACYLGLYCEROL--SERINE O-PHOSPHATIDYLTRANSFERASE
Chiridota_g12195
Chiridota_g12196SI:CH211-108C17.2-RELATED-RELATED
Chiridota_g12197
Chiridota_g12198ZGC:195170
Chiridota_g12199INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g122LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Chiridota_g1220
Chiridota_g12200
Chiridota_g12201RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
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