About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g11889TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Chiridota_g1189
Chiridota_g11890TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Chiridota_g11891
Chiridota_g11892
Chiridota_g11893
Chiridota_g11894
Chiridota_g11895
Chiridota_g11896
Chiridota_g11897
Chiridota_g11898
Chiridota_g11899
Chiridota_g119PROTEIN SIDEKICK
Chiridota_g1190PROTEIN SSUH2 HOMOLOG
Chiridota_g11900
Chiridota_g11901
Chiridota_g11902PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
Chiridota_g11903
Chiridota_g11904
Chiridota_g11905GTP-BINDING PROTEIN ALPHA SUBUNIT
Chiridota_g11906GTP-BINDING PROTEIN ALPHA SUBUNIT
Chiridota_g11907RIBOSOMAL S SUBUNIT
Chiridota_g11908ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
Chiridota_g11909
Chiridota_g1191
Chiridota_g11910THUMP DOMAIN CONTAINING PROTEIN 1-RELATED
Chiridota_g11911METHIONINE-R-SULFOXIDE REDUCTASE B1
Chiridota_g11912POLYCOMB GROUP PROTEIN
Chiridota_g11913UNCHARACTERIZED
Chiridota_g11914PROTEIN CBG04600
Chiridota_g11915TWEETY-RELATED
Chiridota_g11916
Chiridota_g11917TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g11918
Chiridota_g11919TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g1192HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER
Chiridota_g11920TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g11921
Chiridota_g11922
Chiridota_g11923TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g11924
Chiridota_g11925RNA POLYMERASE II-ASSOCIATED PROTEIN 3
Chiridota_g11926DNA2/NAM7 HELICASE FAMILY
Chiridota_g11927
Chiridota_g11928
Chiridota_g11929
Chiridota_g1193PHD FINGER PROTEINS
Chiridota_g11930
Chiridota_g11931TUBERIN
Chiridota_g11932
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