Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00263510 | |
| SKAU_T00263520 | E3 UBIQUITIN-PROTEIN LIGASE RNF26 |
| SKAU_T00263530 | |
| SKAU_T00263540 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| SKAU_T00263550 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER |
| SKAU_T00263560 | ATP SYNTHASE SUBUNIT |
| SKAU_T00263570 | PDZ DOMAIN CONTAINING PROTEIN |
| SKAU_T00263580 | |
| SKAU_T00263590 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| SKAU_T00263600 | HISTONE H4 TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00263610 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00263620 | |
| SKAU_T00263630 | UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE |
| SKAU_T00263640 | UNCHARACTERIZED |
| SKAU_T00263650 | HISTONE H2A |
| SKAU_T00263660 | PORPHOBILINOGEN DEAMINASE |
| SKAU_T00263670 | COATOMER SUBUNIT DELTA |
| SKAU_T00263680 | PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3 |
| SKAU_T00263690 | MACROGLOBULIN / COMPLEMENT |
| SKAU_T00263700 | RGD1562914 |
| SKAU_T00263710 | PROTEIN KINASE RELATED |
| SKAU_T00263720 | |
| SKAU_T00263730 | ACTIVATING TRANSCRIPTION FACTOR ATF 4/5 |
| SKAU_T00263740 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00263750 | ENDONUCLEASE-RELATED |
| SKAU_T00263760 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| SKAU_T00263770 | |
| SKAU_T00263780 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| SKAU_T00263790 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
| SKAU_T00263800 | MITOCHONDRIAL RIBOSOMAL PROTEIN L48 |
| SKAU_T00263810 | RAS-RELATED PROTEIN RAB |
| SKAU_T00263820 | EXPRESSED PROTEIN |
| SKAU_T00263830 | MYELIN-ASSOCIATED NEURITE-OUTGROWTH INHIBITOR-RELATED |
| SKAU_T00263840 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| SKAU_T00263850 | 30S/40S RIBOSOMAL PROTEIN S3 |
| SKAU_T00263860 | REMODELING AND SPACING FACTOR 1 |
| SKAU_T00263870 | CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN |
| SKAU_T00263880 | AQUAPORIN |
| SKAU_T00263890 | SERINE/THREONINE-PROTEIN KINASE TAO |
| SKAU_T00263900 | MYOSIN VII, XV |
| SKAU_T00263910 | MYOSIN VII, XV |
| SKAU_T00263920 | MYOSIN VII, XV |
| SKAU_T00263930 | AGAP003327-PA |
| SKAU_T00263940 | CALPAIN |
| SKAU_T00263950 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00263960 | CULLIN |
| SKAU_T00263970 | DRAB11-RELATED |
| SKAU_T00263980 | DUF914-RELATED |
| SKAU_T00263990 | GH28348P |
| SKAU_T00264000 | KELCH DOMAIN-CONTAINING PROTEIN |
