Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00260510 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00260520 | |
| SKAU_T00260530 | |
| SKAU_T00260540 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| SKAU_T00260550 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
| SKAU_T00260560 | |
| SKAU_T00260570 | |
| SKAU_T00260580 | T-BOX PROTEIN-RELATED |
| SKAU_T00260590 | S -2-HYDROXY-ACID OXIDASE-RELATED |
| SKAU_T00260600 | LD33804P |
| SKAU_T00260610 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
| SKAU_T00260620 | LIPASE |
| SKAU_T00260630 | POPEYE DOMAIN CONTAINING PROTEIN |
| SKAU_T00260640 | CYTOCHROME C OXIDASE COPPER CHAPERONE |
| SKAU_T00260650 | |
| SKAU_T00260660 | CYTOKINE RECEPTOR |
| SKAU_T00260670 | SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 3 |
| SKAU_T00260680 | SAP18 |
| SKAU_T00260690 | THAP DOMAIN PROTEIN |
| SKAU_T00260700 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00260710 | EXPORTIN 4,7-RELATED |
| SKAU_T00260720 | EXPORTIN 4,7-RELATED |
| SKAU_T00260730 | INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG |
| SKAU_T00260740 | 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN |
| SKAU_T00260750 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
| SKAU_T00260760 | PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4 |
| SKAU_T00260770 | CHROMOBOX PROTEIN |
| SKAU_T00260780 | ANKYRIN REPEAT FAMILY PROTEIN |
| SKAU_T00260790 | RNA RECOGNITION MOTIF-CONTAINING |
| SKAU_T00260800 | ZINC FINGER MYM-TYPE PROTEIN |
| SKAU_T00260810 | CONNEXIN |
| SKAU_T00260820 | |
| SKAU_T00260830 | |
| SKAU_T00260840 | |
| SKAU_T00260850 | CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED |
| SKAU_T00260860 | CALCIPRESSIN |
| SKAU_T00260870 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| SKAU_T00260880 | CHONDROITIN SYNTHASE |
| SKAU_T00260890 | |
| SKAU_T00260900 | RUNT RELATED |
| SKAU_T00260910 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
| SKAU_T00260920 | THIOREDOXIN-LIKE PROTEN 4A, 4B |
| SKAU_T00260930 | CENTROMERE PROTEIN Q |
| SKAU_T00260940 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
| SKAU_T00260950 | JUNCTIONAL ADHESION MOLECULE B |
| SKAU_T00260960 | ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL |
| SKAU_T00260970 | ETS |
| SKAU_T00260980 | ALZHEIMER'S DISEASE BETA-AMYLOID RELATED |
| SKAU_T00260990 | CYSTEINE AND TYROSINE-RICH PROTEIN 1 |
| SKAU_T00261000 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
