Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00258510 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| SKAU_T00258520 | |
| SKAU_T00258530 | OS06G0237300 PROTEIN |
| SKAU_T00258540 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00258550 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| SKAU_T00258560 | TRANSMEMBRANE PROTEIN 237 |
| SKAU_T00258570 | CYTOCHROME P450 20A1 |
| SKAU_T00258580 | ABL INTERACTOR FAMILY MEMBER |
| SKAU_T00258590 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
| SKAU_T00258600 | CYTOTOXIC T-LYMPHOCYTE PROTEIN |
| SKAU_T00258610 | TUBULIN POLYGLUTAMYLASE |
| SKAU_T00258620 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| SKAU_T00258630 | ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN |
| SKAU_T00258640 | SODIUM/HYDROGEN EXCHANGER |
| SKAU_T00258650 | TRANSMEMBRANE PROTEIN 182-RELATED |
| SKAU_T00258660 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
| SKAU_T00258670 | |
| SKAU_T00258680 | |
| SKAU_T00258690 | LIM DOMAIN-CONTAINING PROTEIN |
| SKAU_T00258700 | RAN BINDING PROTEIN |
| SKAU_T00258710 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| SKAU_T00258720 | |
| SKAU_T00258730 | BONUS, ISOFORM C-RELATED |
| SKAU_T00258740 | |
| SKAU_T00258750 | |
| SKAU_T00258760 | |
| SKAU_T00258770 | |
| SKAU_T00258780 | |
| SKAU_T00258790 | |
| SKAU_T00258800 | |
| SKAU_T00258810 | SH3 DOMAIN-CONTAINING |
| SKAU_T00258820 | |
| SKAU_T00258830 | SEPTIN |
| SKAU_T00258840 | UNCHARACTERIZED |
| SKAU_T00258850 | B-LYMPHOCYTE ANTIGEN-RELATED |
| SKAU_T00258860 | O-METHYLTRANSFERASE |
| SKAU_T00258870 | RETINOL DEHYDROGENASE |
| SKAU_T00258880 | CD99/MIC2 PROTEIN RELATED |
| SKAU_T00258890 | GLYCOGENIN SUBFAMILY MEMBER |
| SKAU_T00258900 | ARYLSULFATASE FAMILY MEMBER |
| SKAU_T00258910 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| SKAU_T00258920 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| SKAU_T00258930 | COLLAGEN ALPHA |
| SKAU_T00258940 | DRAB5-RELATED |
| SKAU_T00258950 | HEAT SHOCK FACTOR 2-BINDING PROTEIN |
| SKAU_T00258960 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
| SKAU_T00258970 | UNCHARACTERIZED |
| SKAU_T00258980 | |
| SKAU_T00258990 | TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING |
| SKAU_T00259000 |
