Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00257010 | COLLAGEN ALPHA |
| SKAU_T00257020 | HOMEOBOX PROTEIN ENGRAILED |
| SKAU_T00257030 | |
| SKAU_T00257040 | |
| SKAU_T00257050 | |
| SKAU_T00257060 | |
| SKAU_T00257070 | INSULIN-INDUCED GENE 1 |
| SKAU_T00257080 | FIDIPIDINE |
| SKAU_T00257090 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| SKAU_T00257100 | RNA HELICASE |
| SKAU_T00257110 | |
| SKAU_T00257120 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| SKAU_T00257130 | |
| SKAU_T00257140 | |
| SKAU_T00257150 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| SKAU_T00257160 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| SKAU_T00257170 | |
| SKAU_T00257180 | CALPAIN |
| SKAU_T00257190 | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER |
| SKAU_T00257200 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| SKAU_T00257210 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| SKAU_T00257220 | UPF0696 PROTEIN C11ORF68 |
| SKAU_T00257230 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| SKAU_T00257240 | SERINE-THREONINE PROTEIN KINASE |
| SKAU_T00257250 | |
| SKAU_T00257260 | |
| SKAU_T00257270 | CADHERIN-23 |
| SKAU_T00257280 | |
| SKAU_T00257290 | |
| SKAU_T00257300 | |
| SKAU_T00257310 | ACTIN |
| SKAU_T00257320 | SOLUTE CARRIER FAMILY 35, MEMBER F5 |
| SKAU_T00257330 | |
| SKAU_T00257340 | |
| SKAU_T00257350 | CD59 GLYCOPROTEIN |
| SKAU_T00257360 | |
| SKAU_T00257370 | NCK-ASSOCIATED PROTEIN 5 |
| SKAU_T00257380 | |
| SKAU_T00257390 | |
| SKAU_T00257400 | |
| SKAU_T00257410 | |
| SKAU_T00257420 | |
| SKAU_T00257430 | |
| SKAU_T00257440 | |
| SKAU_T00257450 | |
| SKAU_T00257460 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00257470 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| SKAU_T00257480 | SORTING NEXIN-4 |
| SKAU_T00257490 | ZINC FINGER PROTEIN |
| SKAU_T00257500 | HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1 |
