Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00265010 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| SKAU_T00265020 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED |
| SKAU_T00265030 | CALPONIN |
| SKAU_T00265040 | RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F |
| SKAU_T00265050 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| SKAU_T00265060 | OPSIN |
| SKAU_T00265070 | |
| SKAU_T00265080 | TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN |
| SKAU_T00265090 | SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 |
| SKAU_T00265100 | MICROTUBULE-ASSOCIATED PROTEIN |
| SKAU_T00265110 | FOUR AND A HALF LIM DOMAINS PROTEIN 1 |
| SKAU_T00265120 | |
| SKAU_T00265130 | SODIUM/HYDROGEN EXCHANGER |
| SKAU_T00265140 | - |
| SKAU_T00265150 | DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED |
| SKAU_T00265160 | |
| SKAU_T00265170 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00265180 | UNCHARACTERIZED |
| SKAU_T00265190 | HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE |
| SKAU_T00265200 | PHD FINGER PROTEIN |
| SKAU_T00265210 | CALCIUM-BINDING PROTEIN 39-RELATED |
| SKAU_T00265220 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
| SKAU_T00265230 | |
| SKAU_T00265240 | REGULATOR OF G-PROTEIN SIGNALING LOCO |
| SKAU_T00265250 | REGULATOR OF G-PROTEIN SIGNALING LOCO |
| SKAU_T00265260 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED |
| SKAU_T00265270 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
| SKAU_T00265280 | |
| SKAU_T00265290 | SI:CH211-196P9.1-RELATED |
| SKAU_T00265300 | SHISA |
| SKAU_T00265310 | ZINC FINGER C4H2 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00265320 | N4BP1-RELATED |
| SKAU_T00265330 | UNCHARACTERIZED |
| SKAU_T00265340 | MERLIN/MOESIN/EZRIN/RADIXIN |
| SKAU_T00265350 | FERREDOXIN/ADRENODOXIN |
| SKAU_T00265360 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
| SKAU_T00265370 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00265380 | F-BOX ONLY PROTEIN 6-LIKE PROTEIN |
| SKAU_T00265390 | WD REPEAT PROTEIN |
| SKAU_T00265400 | HISTONE H3 |
| SKAU_T00265410 | CONNEXIN |
| SKAU_T00265420 | KICSTOR COMPLEX PROTEIN KAPTIN |
| SKAU_T00265430 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| SKAU_T00265440 | SODIUM/CALCIUM EXCHANGER |
| SKAU_T00265450 | AGAP004733-PA |
| SKAU_T00265460 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
| SKAU_T00265470 | AMINO ACID TRANSPORTER |
| SKAU_T00265480 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| SKAU_T00265490 | CADHERIN-23 |
| SKAU_T00265500 | CADHERIN-23 |
