Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00263010 | NUCLEOREDOXIN |
| SKAU_T00263020 | RRNA METHYLTRANSFERASE 3, |
| SKAU_T00263030 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00263040 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
| SKAU_T00263050 | GPI TRANSAMIDASE COMPONENT PIG-S |
| SKAU_T00263060 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| SKAU_T00263070 | DYNEIN LIGHT CHAIN |
| SKAU_T00263080 | MALARIA ANTIGEN-RELATED |
| SKAU_T00263090 | HEPATOCYTE NUCLEAR FACTOR 1 |
| SKAU_T00263100 | |
| SKAU_T00263110 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| SKAU_T00263120 | AP1 GAMMA SUBUNIT BINDING PROTEIN 1 |
| SKAU_T00263130 | |
| SKAU_T00263140 | IP21249P |
| SKAU_T00263150 | |
| SKAU_T00263160 | TNF RECEPTOR ASSOCIATED FACTOR |
| SKAU_T00263170 | |
| SKAU_T00263180 | CT120 PROTEIN |
| SKAU_T00263190 | 60S RIBOSOMAL PROTEIN L23A |
| SKAU_T00263200 | RAS-RELATED PROTEIN RAB |
| SKAU_T00263210 | ADENINE PHOSPHORIBOSYLTRANSFERASE |
| SKAU_T00263220 | KNIRPS-RELATED PROTEIN-RELATED |
| SKAU_T00263230 | 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FAMILY MEMBER |
| SKAU_T00263240 | POTASSIUM CHANNEL, SUBFAMILY K |
| SKAU_T00263250 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00263260 | KELCH PROTEIN |
| SKAU_T00263270 | MYELIN P0 RELATED |
| SKAU_T00263280 | PROTEASOME ASSEMBLY CHAPERONE 1 |
| SKAU_T00263290 | ETS |
| SKAU_T00263300 | |
| SKAU_T00263310 | |
| SKAU_T00263320 | ETS |
| SKAU_T00263330 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00263340 | INWARD RECTIFIER POTASSIUM CHANNEL |
| SKAU_T00263350 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00263360 | VACUOLAR PROTEIN SORTING 26 RELATED |
| SKAU_T00263370 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| SKAU_T00263380 | PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P |
| SKAU_T00263390 | - |
| SKAU_T00263400 | BIOTIN PROTEIN LIGASE |
| SKAU_T00263410 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| SKAU_T00263420 | |
| SKAU_T00263430 | MINA53 MYC INDUCED NUCLEAR ANTIGEN |
| SKAU_T00263440 | GAF/PUTATIVE CYTOSKELETAL PROTEIN |
| SKAU_T00263450 | |
| SKAU_T00263460 | |
| SKAU_T00263470 | PROTEIN CBG26694 |
| SKAU_T00263480 | |
| SKAU_T00263490 | |
| SKAU_T00263500 | CELL SURFACE GLYCOPROTEIN MUC18-RELATED |
