About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 502 503 504 505 506 507 508 509 510 511 Forward> Last>>        3063 pages in total

Gene IDDescription
CAI8007511.1THIAMINE PYROPHOSPHATE ENZYMES
CAI8007512.1FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED
CAI8007513.1ANTITOXIN HICB
CAI8007514.1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
CAI8007515.1GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
CAI8007516.1PHOSPHOMETHYLPYRIMIDINE KINASE
CAI8007517.1PHOSPHOMETHYLPYRIMIDINE KINASE
CAI8007518.1SLL0198 PROTEIN-RELATED
CAI8007519.1HOMOSERINE DEHYDROGENASE
CAI8007520.1-
CAI8007521.1FORMAMIDASE C869.04-RELATED
CAI8007522.1-
CAI8007523.1XANTHINE DEHYDROGENASE SUBUNIT C-RELATED
CAI8007524.1CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMH
CAI8007525.1-
CAI8007528.1ABC TRANSPORTER ATP-BINDING PROTEIN
CAI8007527.1ABC TRANSPORTER ATP-BINDING PROTEIN
CAI8007526.1ABC TRANSPORTER ATP-BINDING PROTEIN
CAI8007529.1SPERMIDINE N(1)-ACETYLTRANSFERASE
CAI8007530.1KETIMINE REDUCTASE MU-CRYSTALLIN
TOP