About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold8981.20424TOL-PAL SYSTEM PROTEIN TOLB
mRNA.BJAM.scaffold8984.20425
mRNA.BJAM.scaffold8984.20426POLY(A) RNA POLYMERASE
mRNA.BJAM.scaffold8984.20427CAAX PRENYL PROTEASE 1
mRNA.BJAM.scaffold8984.20428FORKHEAD BOX PROTEIN G1
mRNA.BJAM.scaffold8985.20429UNCHARACTERIZED
mRNA.BJAM.scaffold8989.20430ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold899.5692ADENYLATE CYCLASE TYPE 1
mRNA.BJAM.scaffold899.5693
mRNA.BJAM.scaffold899.5694ADENYLATE CYCLASE TYPE 1
mRNA.BJAM.scaffold899.5695PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2
mRNA.BJAM.scaffold899.5696
mRNA.BJAM.scaffold899.5697
mRNA.BJAM.scaffold899.5698NUCLEAR PORE COMPLEX PROTEIN NUP
mRNA.BJAM.scaffold899.5699AAA DOMAIN-CONTAINING
mRNA.BJAM.scaffold8990.20431
mRNA.BJAM.scaffold8990.20432
mRNA.BJAM.scaffold8990.20433
mRNA.BJAM.scaffold8992.20434VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
mRNA.BJAM.scaffold8992.20435
mRNA.BJAM.scaffold8992.20436
mRNA.BJAM.scaffold8993.20437PROTEIN STAR
mRNA.BJAM.scaffold8993.20438
mRNA.BJAM.scaffold8993.20439
mRNA.BJAM.scaffold8995.20440
mRNA.BJAM.scaffold8997.20441UNCHARACTERIZED
mRNA.BJAM.scaffold9.61
mRNA.BJAM.scaffold9.62
mRNA.BJAM.scaffold9.63
mRNA.BJAM.scaffold90.670
mRNA.BJAM.scaffold90.671
mRNA.BJAM.scaffold90.672DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
mRNA.BJAM.scaffold90.673DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
mRNA.BJAM.scaffold90.674ZINC FINGER PROTEIN
mRNA.BJAM.scaffold90.675
mRNA.BJAM.scaffold90.676THYMIDYLATE SYNTHASE 1
mRNA.BJAM.scaffold90.677
mRNA.BJAM.scaffold90.678
mRNA.BJAM.scaffold90.679
mRNA.BJAM.scaffold90.680ENOLASE (DUF1399)
mRNA.BJAM.scaffold90.681
mRNA.BJAM.scaffold90.682DUF914-RELATED
mRNA.BJAM.scaffold900.5700
mRNA.BJAM.scaffold900.5701ZINC FINGER PROTEIN
mRNA.BJAM.scaffold900.5702TUBULIN
mRNA.BJAM.scaffold900.5703OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
mRNA.BJAM.scaffold9001.20442HOMEOBOX PROTEIN NKX
mRNA.BJAM.scaffold9004.20443TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
mRNA.BJAM.scaffold9004.20444PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
mRNA.BJAM.scaffold9004.20445
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