The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6782 | TEMPTIN |
| MBSQW58_g6783 | |
| MBSQW58_g6784 | |
| MBSQW58_g6785 | METHIONINE SULFOXIDE REDUCTASE |
| MBSQW58_g6786 | COILED-COIL DOMAIN-CONTAINING PROTEIN 190 |
| MBSQW58_g6787 | UNCHARACTERIZED |
| MBSQW58_g6788 | |
| MBSQW58_g6789 | |
| MBSQW58_g679 | |
| MBSQW58_g6790 | |
| MBSQW58_g6791 | MACROGLOBULIN / COMPLEMENT |
| MBSQW58_g6792 | |
| MBSQW58_g6793 | LD33695P |
| MBSQW58_g6794 | PRE-MRNA SPLICING FACTOR |
| MBSQW58_g6795 | |
| MBSQW58_g6796 | ATP-DEPENDENT RNA HELICASE |
| MBSQW58_g6797 | |
| MBSQW58_g6798 | RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6799 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
| MBSQW58_g68 | |
| MBSQW58_g680 | SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1 |
| MBSQW58_g6800 | |
| MBSQW58_g6801 | FRIZZLED |
| MBSQW58_g6802 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| MBSQW58_g6803 | SOLUTE CARRIER FAMILY 25 |
| MBSQW58_g6804 | QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE |
| MBSQW58_g6805 | ZINC FINGER PROTEIN |
| MBSQW58_g6806 | |
| MBSQW58_g6807 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
| MBSQW58_g6808 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6809 | C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED |
| MBSQW58_g681 | CONTACTIN 5 |
| MBSQW58_g6810 | UBIQUITIN-PROTEIN LIGASE E3C |
| MBSQW58_g6811 | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 |
| MBSQW58_g6812 | - |
| MBSQW58_g6813 | MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE |
| MBSQW58_g6814 | DOUBLECORTIN DOMAIN CONTAINING 2 |
| MBSQW58_g6815 | SERINE/THREONINE-PROTEIN KINASE |
| MBSQW58_g6816 | MULTIFUNCTIONAL PROTEIN ADE2 |
| MBSQW58_g6817 | TRYPSIN-RELATED |
| MBSQW58_g6818 | |
| MBSQW58_g6819 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| MBSQW58_g682 | |
| MBSQW58_g6820 | XAA-PRO AMINOPEPTIDASE 3 |
| MBSQW58_g6821 | |
| MBSQW58_g6822 | HSC70-INTERACTING PROTEIN |
| MBSQW58_g6823 | |
| MBSQW58_g6824 | DEADENYLATION COMPLEX SUBUNIT PAN3 |
| MBSQW58_g6825 | RAD54-LIKE |
| MBSQW58_g6826 | TRANSCRIPTIONAL REGULATOR ATRX |
