The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6647 | PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED |
| MBSQW58_g6648 | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC |
| MBSQW58_g6649 | MULTICOPPER OXIDASE-RELATED |
| MBSQW58_g665 | MITOGEN-ACTIVATED PROTEIN KINASE |
| MBSQW58_g6650 | |
| MBSQW58_g6651 | |
| MBSQW58_g6652 | AMSH-LIKE PROTEASE |
| MBSQW58_g6653 | OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR |
| MBSQW58_g6654 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| MBSQW58_g6655 | L-GULONOLACTONE OXIDASE |
| MBSQW58_g6656 | TANDEM PH DOMAIN CONTAINING PROTEIN |
| MBSQW58_g6657 | |
| MBSQW58_g6658 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| MBSQW58_g6659 | RIBONUCLEASE H1 |
| MBSQW58_g666 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| MBSQW58_g6660 | RIBONUCLEASE H1 |
| MBSQW58_g6661 | |
| MBSQW58_g6662 | UNCHARACTERIZED |
| MBSQW58_g6663 | FAM13 |
| MBSQW58_g6664 | TRPL TRANSLOCATION DEFECT PROTEIN 14 |
| MBSQW58_g6665 | NUDIX HYDROLASE |
| MBSQW58_g6666 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| MBSQW58_g6667 | UNCHARACTERIZED |
| MBSQW58_g6668 | TP53-REGULATED INHIBITOR OF APOPTOSIS 1 |
| MBSQW58_g6669 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
| MBSQW58_g667 | |
| MBSQW58_g6670 | INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG |
| MBSQW58_g6671 | PHOSPHATIDYLGLYCEROL PHOSPHOLIPASE C |
| MBSQW58_g6672 | DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN |
| MBSQW58_g6673 | PRE-MRNA-PROCESSING FACTOR 19 |
| MBSQW58_g6674 | |
| MBSQW58_g6675 | PROSTAGLANDIN REDUCTASE |
| MBSQW58_g6676 | MEIOSIS-EXPRESSED GENE 1 PROTEIN |
| MBSQW58_g6677 | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED |
| MBSQW58_g6678 | PROTEIN SSUH2 HOMOLOG |
| MBSQW58_g6679 | |
| MBSQW58_g668 | RHO GUANINE EXCHANGE FACTOR-RELATED |
| MBSQW58_g6680 | FORKHEAD BOX PROTEIN |
| MBSQW58_g6681 | COATOMER |
| MBSQW58_g6682 | SOLUTE CARRIER FAMILY 2 |
| MBSQW58_g6683 | |
| MBSQW58_g6684 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
| MBSQW58_g6685 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| MBSQW58_g6686 | NADH-UBIQUINONE OXIDOREDUCTASE SGDH SUBUNIT |
| MBSQW58_g6687 | SPERM ASSOCIATED ANTIGEN 7 |
| MBSQW58_g6688 | SEGMENT POLARITY PROTEIN DISHEVELLED |
| MBSQW58_g6689 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| MBSQW58_g669 | TENSIN |
| MBSQW58_g6690 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g6691 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
