The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g6601 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
| MBSQW58_g6602 | |
| MBSQW58_g6603 | UBIQUITIN |
| MBSQW58_g6604 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6605 | SCP160 |
| MBSQW58_g6606 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| MBSQW58_g6607 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| MBSQW58_g6608 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| MBSQW58_g6609 | UNCHARACTERIZED |
| MBSQW58_g661 | |
| MBSQW58_g6610 | |
| MBSQW58_g6611 | |
| MBSQW58_g6612 | |
| MBSQW58_g6613 | |
| MBSQW58_g6614 | DNAJ HOMOLOG SUBFAMILY C MEMBER 7 |
| MBSQW58_g6615 | FATTY ACID DESATURASE 2 |
| MBSQW58_g6616 | HISTONE PARYLATION FACTOR 1 |
| MBSQW58_g6617 | THAP DOMAIN PROTEIN |
| MBSQW58_g6618 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g6619 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
| MBSQW58_g662 | |
| MBSQW58_g6620 | NUCLEAR HORMONE RECEPTOR |
| MBSQW58_g6621 | MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 |
| MBSQW58_g6622 | - |
| MBSQW58_g6623 | GOLGI REASSEMBLY STACKING PROTEIN GRASP |
| MBSQW58_g6624 | |
| MBSQW58_g6625 | CHONDROITIN SYNTHASE |
| MBSQW58_g6626 | VACUOLAR IMPORT AND DEGRADATION PROTEIN 24 |
| MBSQW58_g6627 | |
| MBSQW58_g6628 | |
| MBSQW58_g6629 | |
| MBSQW58_g663 | GALACTOSE-3-O-SULFOTRANSFERASE |
| MBSQW58_g6630 | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] |
| MBSQW58_g6631 | |
| MBSQW58_g6632 | ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR |
| MBSQW58_g6633 | |
| MBSQW58_g6634 | |
| MBSQW58_g6635 | VILLIN |
| MBSQW58_g6636 | FATTY ACID DESATURASE 2 |
| MBSQW58_g6637 | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL |
| MBSQW58_g6638 | CYCLIN Y, ISOFORM A |
| MBSQW58_g6639 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| MBSQW58_g664 | U6 SNRNA-ASSOCIATED PROTEIN |
| MBSQW58_g6640 | |
| MBSQW58_g6641 | |
| MBSQW58_g6642 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| MBSQW58_g6643 | NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED |
| MBSQW58_g6644 | |
| MBSQW58_g6645 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| MBSQW58_g6646 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
