The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032885871.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| XP_032885872.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| XP_032885873.1 | TRANSCRIPTION FACTOR COE FAMILY MEMBER |
| XP_032885874.1 | RING ZINC FINGER PROTEIN |
| XP_032885875.1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| XP_032885876.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| XP_032885877.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| XP_032885878.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| XP_032885879.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| XP_032885880.1 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| XP_032885881.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| XP_032885882.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| XP_032885883.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| XP_032885884.1 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| XP_032885885.1 | CYTOKINE-LIKE PROTEIN 1 |
| XP_032885886.1 | CYTOKINE-LIKE PROTEIN 1 |
| XP_032885887.1 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| XP_032885888.1 | DIMETHYLADENOSINE TRANSFERASE |
| XP_032885889.1 | PROGRAMMED CELL DEATH 4 |
| XP_032885890.1 | PROGRAMMED CELL DEATH 4 |
| XP_032885891.1 | VESICULAR MANNOSE-BINDING LECTIN |
| XP_032885892.1 | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 |
| XP_032885893.1 | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 |
| XP_032885894.1 | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 |
| XP_032885895.1 | FIBROBLAST GROWTH FACTOR |
| XP_032885896.1 | WD40 REPEAT PF20 |
| XP_032885897.1 | WD40 REPEAT PF20 |
| XP_032885898.1 | WD40 REPEAT PF20 |
| XP_032885899.1 | NUCLEOPLASMIN |
| XP_032885900.1 | IP01054P |
| XP_032885901.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032885902.1 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED |
| XP_032885903.1 | SH2 DOMAIN CONTAINING PROTEIN |
| XP_032885904.1 | SH2 DOMAIN CONTAINING PROTEIN |
| XP_032885905.1 | B-BOX DOMAIN CONTAINING |
| XP_032885906.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032885907.1 | CALCIUM BINDING PROTEINS |
| XP_032885908.1 | CALCIUM BINDING PROTEINS |
| XP_032885909.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| XP_032885910.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| XP_032885911.1 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| XP_032885912.1 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| XP_032885913.1 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| XP_032885914.1 | UBIQUITIN INTERACTION MOTIF-CONTAINING PROTEIN 1 |
| XP_032885915.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| XP_032885916.1 | 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] |
| XP_032885917.1 | LUPUS LA PROTEIN-RELATED |
| XP_032885918.1 | LUPUS LA PROTEIN-RELATED |
| XP_032885919.1 | LUPUS LA PROTEIN-RELATED |
| XP_032885920.1 | RING FINGER PROTEIN 127 |
